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  5. Mp8g04000.1

Mp8g04000.1


Description : Probable protein phosphatase 2C 71 OS=Oryza sativa subsp. japonica (sp|q339d2|p2c71_orysj : 217.0)


Gene families : OG0000571 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000571_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp8g04000.1

Target Alias Description ECC score Gene Family Method Actions
Aev_g47640 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0006.g009920 No alias not classified & original description: CDS=16-1062 0.03 OrthoFinder output from all 47 species
Cba_g68354 No alias component *(eL29) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Ceric.13G062800.1 Ceric.13G062800 not classified & original description: pacid=50635080... 0.06 OrthoFinder output from all 47 species
Dac_g09847 No alias phosphatase *(PBCP) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g26968 No alias phosphatase *(PBCP) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g09215 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g09692 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g16568 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g12898 No alias phosphatase *(PBCP) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc07g064310.2.1 Solyc07g064310 Probable protein phosphatase 2C 55 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Spa_g06001 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e006113_P001 Zm00001e006113 Probable protein phosphatase 2C 55 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Zm00001e011809_P002 Zm00001e011809 Probable protein phosphatase 2C 55 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004813 alanine-tRNA ligase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006419 alanyl-tRNA aminoacylation IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase-like_dom 281 488
No external refs found!