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  5. Mp8g01100.1

Mp8g01100.1


Description : GTP-binding protein At3g49725, chloroplastic OS=Arabidopsis thaliana (sp|q0wtb4|y3725_arath : 138.0)


Gene families : OG0006792 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006792_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp8g01100.1
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00233660 evm_27.TU.AmTr_v1... GTP-binding protein At3g49725, chloroplastic... 0.04 OrthoFinder output from all 47 species
AT5G57960 No alias GTP-binding protein, HflX 0.05 OrthoFinder output from all 47 species
Adi_g059600 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g03313 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g02139 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g20881 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16169 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g10418 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.34G037600.1 Ceric.34G037600 not classified & original description: pacid=50623913... 0.05 OrthoFinder output from all 47 species
Ehy_g16567 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01009778001 No alias GTP-binding protein At3g49725, chloroplastic... 0.03 OrthoFinder output from all 47 species
Gb_27515 No alias component MED19 of head module of MEDIATOR transcription... 0.02 OrthoFinder output from all 47 species
LOC_Os11g38020.1 LOC_Os11g38020 GTP-binding protein At3g49725, chloroplastic... 0.05 OrthoFinder output from all 47 species
MA_10437248g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g06486 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g31437 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g19828 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g48993 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g64021 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000177 No alias not classified & original description: CDS=27-1817 0.04 OrthoFinder output from all 47 species
Sam_g18146 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo77541 No alias GTP-binding protein At3g49725, chloroplastic... 0.05 OrthoFinder output from all 47 species
Solyc04g080770.3.1 Solyc04g080770 GTP-binding protein At3g49725, chloroplastic... 0.06 OrthoFinder output from all 47 species
Spa_g07834 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e021243_P003 Zm00001e021243 GTP-binding protein At3g49725, chloroplastic... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004556 alpha-amylase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009536 plastid IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
MF GO:0046422 violaxanthin de-epoxidase activity IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR006073 GTP-bd 438 556
IPR032305 GTP-bd_M 353 430
IPR025121 GTPase_HflX_N 262 350
No external refs found!