Aliases : HCHIB, B-CHI, ATHCHIB, PR-3, PR3, CHI-B
Description : CTL cellulose microfibrils and hemicellulose interaction protein
Gene families : OG0004024 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004024_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Mp7g04510.1 | |
Cluster | HCCA: Cluster_30 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00022p00097040 | HOT2, ELP,... | Cell wall.cellulose.synthesis.cellulose microfibrils and... | 0.04 | OrthoFinder output from all 47 species | |
AT1G05850 | HOT2, ELP,... | Chitinase family protein | 0.05 | OrthoFinder output from all 47 species | |
AT3G16920 | CTL2, ATCTL2 | chitinase-like protein 2 | 0.03 | OrthoFinder output from all 47 species | |
Adi_g013018 | HOT2, ELP,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g058657 | HOT2, ELP,... | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Adi_g086739 | HOT2, ELP,... | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aev_g12871 | HOT2, ELP,... | regulatory protein *(CTL) of cellulose-hemicellulose... | 0.03 | OrthoFinder output from all 47 species | |
Ala_g11734 | HOT2, ELP,... | regulatory protein *(CTL) of cellulose-hemicellulose... | 0.03 | OrthoFinder output from all 47 species | |
Als_g10357 | HOT2, ELP,... | regulatory protein *(CTL) of cellulose-hemicellulose... | 0.06 | OrthoFinder output from all 47 species | |
Als_g36532 | HOT2, ELP,... | regulatory protein *(CTL) of cellulose-hemicellulose... | 0.01 | OrthoFinder output from all 47 species | |
Aob_g14857 | HOT2, ELP,... | regulatory protein *(CTL) of cellulose-hemicellulose... | 0.04 | OrthoFinder output from all 47 species | |
Aop_g04697 | HOT2, ELP,... | regulatory protein *(CTL) of cellulose-hemicellulose... | 0.07 | OrthoFinder output from all 47 species | |
Cba_g05713 | HOT2, ELP,... | regulatory protein *(CTL) of cellulose-hemicellulose... | 0.03 | OrthoFinder output from all 47 species | |
Cba_g08686 | HOT2, ELP,... | regulatory protein *(CTL) of cellulose-hemicellulose... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.12G097100.1 | HOT2, ELP,... | regulatory protein *(CTL) of cellulose-hemicellulose... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.34G040100.1 | HOT2, ELP,... | regulatory protein *(CTL) of cellulose-hemicellulose... | 0.05 | OrthoFinder output from all 47 species | |
Dac_g24169 | HOT2, ELP,... | regulatory protein *(CTL) of cellulose-hemicellulose... | 0.06 | OrthoFinder output from all 47 species | |
Dcu_g41169 | HOT2, ELP,... | regulatory protein *(CTL) of cellulose-hemicellulose... | 0.05 | OrthoFinder output from all 47 species | |
Dde_g19197 | HOT2, ELP,... | regulatory protein *(CTL) of cellulose-hemicellulose... | 0.09 | OrthoFinder output from all 47 species | |
Ehy_g11684 | HOT2, ELP,... | regulatory protein *(CTL) of cellulose-hemicellulose... | 0.07 | OrthoFinder output from all 47 species | |
Ehy_g12346 | HOT2, ELP,... | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ehy_g31474 | HOT2, ELP,... | regulatory protein *(CTL) of cellulose-hemicellulose... | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g31475 | HOT2, ELP,... | regulatory protein *(CTL) of cellulose-hemicellulose... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01031685001 | HOT2, ELP,... | Cell wall.cellulose.synthesis.cellulose microfibrils and... | 0.07 | OrthoFinder output from all 47 species | |
GSVIVT01035029001 | CTL2, ATCTL2 | Cell wall.cellulose.synthesis.cellulose microfibrils and... | 0.05 | OrthoFinder output from all 47 species | |
Gb_05672 | No alias | CTL cellulose microfibrils and hemicellulose interaction protein | 0.04 | OrthoFinder output from all 47 species | |
Gb_10203 | No alias | CTL cellulose microfibrils and hemicellulose interaction protein | 0.02 | OrthoFinder output from all 47 species | |
Gb_10245 | CTL2, ATCTL2 | CTL cellulose microfibrils and hemicellulose interaction protein | 0.06 | OrthoFinder output from all 47 species | |
LOC_Os09g32080.2 | HOT2, ELP,... | CTL cellulose microfibrils and hemicellulose interaction protein | 0.08 | OrthoFinder output from all 47 species | |
Len_g11945 | HOT2, ELP,... | regulatory protein *(CTL) of cellulose-hemicellulose... | 0.08 | OrthoFinder output from all 47 species | |
Lfl_g08383 | HOT2, ELP,... | regulatory protein *(CTL) of cellulose-hemicellulose... | 0.05 | OrthoFinder output from all 47 species | |
MA_10435764g0010 | HOT2, ELP,... | Chitinase-like protein 1 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
Msp_g08778 | HOT2, ELP,... | regulatory protein *(CTL) of cellulose-hemicellulose... | 0.04 | OrthoFinder output from all 47 species | |
Nbi_g16520 | HOT2, ELP,... | regulatory protein *(CTL) of cellulose-hemicellulose... | 0.05 | OrthoFinder output from all 47 species | |
Ore_g10891 | HOT2, ELP,... | regulatory protein *(CTL) of cellulose-hemicellulose... | 0.07 | OrthoFinder output from all 47 species | |
Pir_g19511 | HOT2, ELP,... | regulatory protein *(CTL) of cellulose-hemicellulose... | 0.04 | OrthoFinder output from all 47 species | |
Pnu_g09632 | CTL2, ATCTL2 | regulatory protein *(CTL) of cellulose-hemicellulose... | 0.07 | OrthoFinder output from all 47 species | |
Ppi_g62066 | HOT2, ELP,... | regulatory protein *(CTL) of cellulose-hemicellulose... | 0.05 | OrthoFinder output from all 47 species | |
Sam_g17794 | No alias | regulatory protein *(CTL) of cellulose-hemicellulose... | 0.04 | OrthoFinder output from all 47 species | |
Sam_g26662 | No alias | regulatory protein *(CTL) of cellulose-hemicellulose... | 0.05 | OrthoFinder output from all 47 species | |
Sam_g26663 | No alias | regulatory protein *(CTL) of cellulose-hemicellulose... | 0.02 | OrthoFinder output from all 47 species | |
Sam_g36534 | No alias | regulatory protein *(CTL) of cellulose-hemicellulose... | 0.04 | OrthoFinder output from all 47 species | |
Smo227948 | HOT2, ELP,... | Cell wall.cellulose.synthesis.cellulose microfibrils and... | 0.07 | OrthoFinder output from all 47 species | |
Solyc09g098540.3.1 | HOT2, ELP,... | CTL cellulose microfibrils and hemicellulose interaction protein | 0.07 | OrthoFinder output from all 47 species | |
Spa_g25324 | HOT2, ELP,... | regulatory protein *(CTL) of cellulose-hemicellulose... | 0.07 | OrthoFinder output from all 47 species | |
Tin_g04554 | HOT2, ELP,... | regulatory protein *(CTL) of cellulose-hemicellulose... | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e034566_P001 | HOT2, ELP,... | CTL cellulose microfibrils and hemicellulose interaction protein | 0.05 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004568 | chitinase activity | IEA | Interproscan |
BP | GO:0006032 | chitin catabolic process | IEA | Interproscan |
BP | GO:0016998 | cell wall macromolecule catabolic process | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000151 | ubiquitin ligase complex | IEP | HCCA |
CC | GO:0000152 | nuclear ubiquitin ligase complex | IEP | HCCA |
BP | GO:0000271 | polysaccharide biosynthetic process | IEP | HCCA |
MF | GO:0003924 | GTPase activity | IEP | HCCA |
CC | GO:0005575 | cellular_component | IEP | HCCA |
CC | GO:0005576 | extracellular region | IEP | HCCA |
CC | GO:0005618 | cell wall | IEP | HCCA |
CC | GO:0005680 | anaphase-promoting complex | IEP | HCCA |
BP | GO:0005975 | carbohydrate metabolic process | IEP | HCCA |
BP | GO:0005976 | polysaccharide metabolic process | IEP | HCCA |
BP | GO:0006073 | cellular glucan metabolic process | IEP | HCCA |
BP | GO:0007088 | regulation of mitotic nuclear division | IEP | HCCA |
BP | GO:0007346 | regulation of mitotic cell cycle | IEP | HCCA |
MF | GO:0008234 | cysteine-type peptidase activity | IEP | HCCA |
BP | GO:0009250 | glucan biosynthetic process | IEP | HCCA |
MF | GO:0009678 | pyrophosphate hydrolysis-driven proton transmembrane transporter activity | IEP | HCCA |
BP | GO:0009966 | regulation of signal transduction | IEP | HCCA |
BP | GO:0010564 | regulation of cell cycle process | IEP | HCCA |
BP | GO:0010646 | regulation of cell communication | IEP | HCCA |
BP | GO:0010965 | regulation of mitotic sister chromatid separation | IEP | HCCA |
MF | GO:0015078 | proton transmembrane transporter activity | IEP | HCCA |
CC | GO:0016020 | membrane | IEP | HCCA |
BP | GO:0016051 | carbohydrate biosynthetic process | IEP | HCCA |
MF | GO:0016462 | pyrophosphatase activity | IEP | HCCA |
MF | GO:0016757 | glycosyltransferase activity | IEP | HCCA |
MF | GO:0016758 | hexosyltransferase activity | IEP | HCCA |
MF | GO:0016759 | cellulose synthase activity | IEP | HCCA |
MF | GO:0016760 | cellulose synthase (UDP-forming) activity | IEP | HCCA |
MF | GO:0016762 | xyloglucan:xyloglucosyl transferase activity | IEP | HCCA |
MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | HCCA |
MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | HCCA |
MF | GO:0017111 | ribonucleoside triphosphate phosphatase activity | IEP | HCCA |
MF | GO:0019829 | ATPase-coupled monoatomic cation transmembrane transporter activity | IEP | HCCA |
MF | GO:0022853 | active monoatomic ion transmembrane transporter activity | IEP | HCCA |
BP | GO:0023051 | regulation of signaling | IEP | HCCA |
BP | GO:0030071 | regulation of mitotic metaphase/anaphase transition | IEP | HCCA |
BP | GO:0030243 | cellulose metabolic process | IEP | HCCA |
BP | GO:0030244 | cellulose biosynthetic process | IEP | HCCA |
CC | GO:0030312 | external encapsulating structure | IEP | HCCA |
MF | GO:0030599 | pectinesterase activity | IEP | HCCA |
CC | GO:0031461 | cullin-RING ubiquitin ligase complex | IEP | HCCA |
BP | GO:0033043 | regulation of organelle organization | IEP | HCCA |
BP | GO:0033044 | regulation of chromosome organization | IEP | HCCA |
BP | GO:0033045 | regulation of sister chromatid segregation | IEP | HCCA |
BP | GO:0033047 | regulation of mitotic sister chromatid segregation | IEP | HCCA |
CC | GO:0033178 | proton-transporting two-sector ATPase complex, catalytic domain | IEP | HCCA |
BP | GO:0033692 | cellular polysaccharide biosynthetic process | IEP | HCCA |
BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | HCCA |
MF | GO:0035251 | UDP-glucosyltransferase activity | IEP | HCCA |
BP | GO:0042545 | cell wall modification | IEP | HCCA |
MF | GO:0042625 | ATPase-coupled ion transmembrane transporter activity | IEP | HCCA |
BP | GO:0044042 | glucan metabolic process | IEP | HCCA |
BP | GO:0044238 | primary metabolic process | IEP | HCCA |
BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | HCCA |
BP | GO:0044264 | cellular polysaccharide metabolic process | IEP | HCCA |
MF | GO:0044769 | ATPase activity, coupled to transmembrane movement of ions, rotational mechanism | IEP | HCCA |
BP | GO:0045229 | external encapsulating structure organization | IEP | HCCA |
MF | GO:0046527 | glucosyltransferase activity | IEP | HCCA |
MF | GO:0046961 | proton-transporting ATPase activity, rotational mechanism | IEP | HCCA |
CC | GO:0048046 | apoplast | IEP | HCCA |
BP | GO:0048583 | regulation of response to stimulus | IEP | HCCA |
BP | GO:0051128 | regulation of cellular component organization | IEP | HCCA |
BP | GO:0051273 | beta-glucan metabolic process | IEP | HCCA |
BP | GO:0051274 | beta-glucan biosynthetic process | IEP | HCCA |
BP | GO:0051726 | regulation of cell cycle | IEP | HCCA |
BP | GO:0051783 | regulation of nuclear division | IEP | HCCA |
BP | GO:0051983 | regulation of chromosome segregation | IEP | HCCA |
MF | GO:0052689 | carboxylic ester hydrolase activity | IEP | HCCA |
BP | GO:0071555 | cell wall organization | IEP | HCCA |
BP | GO:0090231 | regulation of spindle checkpoint | IEP | HCCA |
BP | GO:0090266 | regulation of mitotic cell cycle spindle assembly checkpoint | IEP | HCCA |
CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
BP | GO:1901976 | regulation of cell cycle checkpoint | IEP | HCCA |
BP | GO:1901987 | regulation of cell cycle phase transition | IEP | HCCA |
BP | GO:1901990 | regulation of mitotic cell cycle phase transition | IEP | HCCA |
BP | GO:1902099 | regulation of metaphase/anaphase transition of cell cycle | IEP | HCCA |
BP | GO:1902531 | regulation of intracellular signal transduction | IEP | HCCA |
BP | GO:1902600 | proton transmembrane transport | IEP | HCCA |
BP | GO:1903504 | regulation of mitotic spindle checkpoint | IEP | HCCA |
BP | GO:1905818 | regulation of chromosome separation | IEP | HCCA |
CC | GO:1990234 | transferase complex | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000726 | Glyco_hydro_19_cat | 46 | 278 |
No external refs found! |