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  5. Mp6g18380.1

Mp6g18380.1


Description : component eIF3j of eIF3 mRNA-to-PIC binding complex


Gene families : OG0003438 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003438_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp6g18380.1
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
Adi_g076863 No alias component *(eIF3j) of eIF3 mRNA-to-PIC binding complex &... 0.02 OrthoFinder output from all 47 species
Aop_g28306 No alias component *(eIF3j) of eIF3 mRNA-to-PIC binding complex &... 0.01 OrthoFinder output from all 47 species
Aspi01Gene37283.t1 Aspi01Gene37283 component *(eIF3j) of eIF3 mRNA-to-PIC binding complex &... 0.02 OrthoFinder output from all 47 species
Cba_g24359 No alias component *(eIF3j) of eIF3 mRNA-to-PIC binding complex &... 0.03 OrthoFinder output from all 47 species
Ceric.01G111000.1 Ceric.01G111000 component *(eIF3j) of eIF3 mRNA-to-PIC binding complex &... 0.02 OrthoFinder output from all 47 species
Ehy_g21917 No alias component *(eIF3j) of eIF3 mRNA-to-PIC binding complex &... 0.02 OrthoFinder output from all 47 species
GSVIVT01000052001 No alias Protein biosynthesis.translation... 0.05 OrthoFinder output from all 47 species
Gb_31801 No alias component eIF3j of eIF3 mRNA-to-PIC binding complex 0.02 OrthoFinder output from all 47 species
Sam_g15081 No alias component *(eIF3j) of eIF3 mRNA-to-PIC binding complex &... 0.03 OrthoFinder output from all 47 species
Solyc02g079060.3.1 Solyc02g079060 component eIF3j of eIF3 mRNA-to-PIC binding complex 0.03 OrthoFinder output from all 47 species
Tin_g00564 No alias component *(eIF3j) of eIF3 mRNA-to-PIC binding complex &... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEA Interproscan
CC GO:0005737 cytoplasm IEA Interproscan
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005048 signal sequence binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005786 signal recognition particle, endoplasmic reticulum targeting IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008312 7S RNA binding IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0030942 endoplasmic reticulum signal peptide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042277 peptide binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
CC GO:0048500 signal recognition particle IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR013906 eIF3j 58 222
No external refs found!