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  5. Mp5g04380.1

Mp5g04380.1


Description : component RPS2 of SSU proteome


Gene families : OG0001457 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001457_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp5g04380.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00212950 XW6,... Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder output from all 47 species
AT2G41840 No alias Ribosomal protein S5 family protein 0.03 OrthoFinder output from all 47 species
Azfi_s0110.g045473 No alias component *(uS5) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Ceric.30G013900.1 Ceric.30G013900 component *(uS5) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020961.135 XW6 Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder output from all 47 species
Cre01.g039250 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
GSVIVT01033299001 No alias 40S ribosomal protein S2-4 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os03g59310.1 LOC_Os03g59310 component RPS2 of SSU proteome 0.02 OrthoFinder output from all 47 species
LOC_Os07g10660.1 LOC_Os07g10660 component RPS2 of SSU proteome 0.04 OrthoFinder output from all 47 species
Len_g11361 No alias component *(uS5) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Pir_g57889 No alias component *(uS5) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Pp3c20_18740V3.1 Pp3c20_18740 Ribosomal protein S5 family protein 0.02 OrthoFinder output from all 47 species
Pp3c24_5780V3.1 Pp3c24_5780 Ribosomal protein S5 family protein 0.02 OrthoFinder output from all 47 species
Sam_g25636 No alias component *(uS5) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Sam_g26796 No alias component *(uS5) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Smo67484 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder output from all 47 species
Solyc04g063290.3.1 Solyc04g063290 component RPS2 of SSU proteome 0.03 OrthoFinder output from all 47 species
Solyc04g074300.3.1 Solyc04g074300 component RPS2 of SSU proteome 0.03 OrthoFinder output from all 47 species
Spa_g14513 No alias component *(uS5) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Spa_g40249 No alias component *(uS5) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Spa_g47984 No alias component *(uS5) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Spa_g50366 No alias component *(uS5) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004486 methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity IEP HCCA
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004814 arginine-tRNA ligase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006420 arginyl-tRNA aminoacylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP HCCA
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR005324 Ribosomal_S5_C 174 245
IPR013810 Ribosomal_S5_N 91 155
No external refs found!