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  5. Mp4g14950.1

Mp4g14950.1


Description : no hits & (original description: none)


Gene families : OG0004892 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004892_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp4g14950.1
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
AT1G42440 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.09 OrthoFinder output from all 47 species
Adi_g020528 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g01362 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08980 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0402.g068300 No alias not classified & original description: CDS=78-2465 0.03 OrthoFinder output from all 47 species
Ceric.23G085500.1 Ceric.23G085500 not classified & original description: pacid=50610969... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021357.35 No alias No description available 0.04 OrthoFinder output from all 47 species
Cre16.g673700 No alias No description available 0.2 OrthoFinder output from all 47 species
Dac_g14047 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08205 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g00851 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01013363001 No alias No description available 0.05 OrthoFinder output from all 47 species
Gb_29644 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os11g19250.1 LOC_Os11g19250 no hits & (original description: none) 0.12 OrthoFinder output from all 47 species
MA_74958g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_79106g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_834870g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Nbi_g03802 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g31248 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0015.g006669 No alias not classified & original description: CDS=82-2439 0.02 OrthoFinder output from all 47 species
Sam_g06729 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo123319 No alias No description available 0.09 OrthoFinder output from all 47 species
Solyc04g082330.3.1 Solyc04g082330 no hits & (original description: none) 0.16 OrthoFinder output from all 47 species
Tin_g08557 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e029566_P001 Zm00001e029566 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
BP GO:0042254 ribosome biogenesis IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005047 signal recognition particle binding IEP HCCA
MF GO:0005048 signal sequence binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005786 signal recognition particle, endoplasmic reticulum targeting IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008312 7S RNA binding IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0030942 endoplasmic reticulum signal peptide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042277 peptide binding IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
CC GO:0048500 signal recognition particle IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR007034 BMS1_TSR1_C 508 802
IPR012948 AARP2CN 247 324
No external refs found!