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  5. Mp3g25110.1

Mp3g25110.1


Description : C3H zinc finger transcription factor


Gene families : OG0004039 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004039_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp3g25110.1

Target Alias Description ECC score Gene Family Method Actions
Aop_g11762 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000704.66 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.01 OrthoFinder output from all 47 species
Cre01.g014050 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.03 OrthoFinder output from all 47 species
Dcu_g01432 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
LOC_Os01g61830.1 LOC_Os01g61830 C3H zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Ppi_g22082 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Tin_g07343 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Zm00001e019376_P001 Zm00001e019376 C3H zinc finger transcription factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR032378 ZC3H15/TMA46_C 227 310
No external refs found!