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  5. Mp3g22820.1

Mp3g22820.1 (AMY3, ATAMY3)


Aliases : AMY3, ATAMY3

Description : alpha amylase


Gene families : OG0000515 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000515_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp3g22820.1
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00105470 AMY3, ATAMY3,... Carbohydrate metabolism.starch... 0.06 OrthoFinder output from all 47 species
AMTR_s00110p00125590 AMY3, ATAMY3,... Carbohydrate metabolism.starch... 0.04 OrthoFinder output from all 47 species
AT1G69830 AMY3, ATAMY3 alpha-amylase-like 3 0.04 OrthoFinder output from all 47 species
Aev_g12545 AMY1, ATAMY1 alpha amylase & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g19722 AMY3, ATAMY3 alpha amylase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g15129 AMY3, ATAMY3 alpha amylase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g61164 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g18360 AMY3, ATAMY3 alpha amylase & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene13965.t2 AMY3, ATAMY3,... alpha amylase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene13966.t1 AMY3, ATAMY3,... alpha amylase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene40723.t1 AMY3, ATAMY3,... alpha amylase & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75148 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g16674 AMY3, ATAMY3 alpha amylase & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g11602 AMY3, ATAMY3 alpha amylase & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g02269 AMY3, ATAMY3 alpha amylase & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g25602 AMY3, ATAMY3 alpha amylase & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g003998 AMY3, ATAMY3 alpha amylase & original description: CDS=136-3117 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0102.g019864 AMY3, ATAMY3 alpha amylase & original description: CDS=226-6474 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0004556 alpha-amylase activity IEA Interproscan
MF GO:0005509 calcium ion binding IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004820 glycine-tRNA ligase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006426 glycyl-tRNA aminoacylation IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR012850 A-amylase_bs_C 932 994
IPR006047 Glyco_hydro_13_cat_dom 628 911
No external refs found!