Mp3g19780.1 (PSB27)

Aliases : PSB27

Description : Psb27 protein involved in PS-II assembly

Gene families : OG0006913 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006913_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Mp3g19780.1
Cluster	HCCA: Cluster_32

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00003p00251710	PSB27,...	Photosynthesis.photophosphorylation.photosystem...	0.02	OrthoFinder output from all 47 species
AT1G03600	PSB27	photosystem II family protein	0.25	OrthoFinder output from all 47 species
Adi_g017378	PSB27	protein involved in PS-II assembly *(Psb27) & original...	0.15	OrthoFinder output from all 47 species
Adi_g017379	PSB27	protein involved in PS-II assembly *(Psb27) & original...	0.14	OrthoFinder output from all 47 species
Ala_g03684	PSB27	protein involved in PS-II assembly *(Psb27) & original...	0.09	OrthoFinder output from all 47 species
Aob_g03856	PSB27	protein involved in PS-II assembly *(Psb27) & original...	0.08	OrthoFinder output from all 47 species
Aop_g01610	PSB27	protein involved in PS-II assembly *(Psb27) & original...	0.09	OrthoFinder output from all 47 species
Aspi01Gene05705.t1	PSB27, Aspi01Gene05705	protein involved in PS-II assembly *(Psb27) & original...	0.06	OrthoFinder output from all 47 species
Azfi_s0531.g075849	PSB27	protein involved in PS-II assembly *(Psb27) & original...	0.07	OrthoFinder output from all 47 species
Ceric.35G049900.1	PSB27, Ceric.35G049900	protein involved in PS-II assembly *(Psb27) & original...	0.35	OrthoFinder output from all 47 species
Cre05.g243800	PSB27	Photosynthesis.photophosphorylation.photosystem...	0.21	OrthoFinder output from all 47 species
Dac_g02601	PSB27	protein involved in PS-II assembly *(Psb27) & original...	0.08	OrthoFinder output from all 47 species
Dcu_g44405	PSB27	protein involved in PS-II assembly *(Psb27) & original...	0.09	OrthoFinder output from all 47 species
Dde_g21620	PSB27	protein involved in PS-II assembly *(Psb27) & original...	0.11	OrthoFinder output from all 47 species
Ehy_g19278	PSB27	protein involved in PS-II assembly *(Psb27) & original...	0.18	OrthoFinder output from all 47 species
Ehy_g20883	PSB27	protein involved in PS-II assembly *(Psb27) & original...	0.06	OrthoFinder output from all 47 species
GSVIVT01030552001	PSB27	Photosynthesis.photophosphorylation.photosystem...	0.12	OrthoFinder output from all 47 species
Gb_23437	PSB27	Psb27 protein involved in PS-II assembly	0.05	OrthoFinder output from all 47 species
LOC_Os03g21560.1	PSB27, LOC_Os03g21560	Psb27 protein involved in PS-II assembly	0.31	OrthoFinder output from all 47 species
Len_g11187	PSB27	protein involved in PS-II assembly *(Psb27) & original...	0.2	OrthoFinder output from all 47 species
MA_388691g0010	PSB27	Psb27 protein involved in PS-II assembly	0.19	OrthoFinder output from all 47 species
Msp_g04977	PSB27	protein involved in PS-II assembly *(Psb27) & original...	0.17	OrthoFinder output from all 47 species
Nbi_g03338	PSB27	protein involved in PS-II assembly *(Psb27) & original...	0.19	OrthoFinder output from all 47 species
Pir_g09257	PSB27	protein involved in PS-II assembly *(Psb27) & original...	0.14	OrthoFinder output from all 47 species
Ppi_g10971	PSB27	protein involved in PS-II assembly *(Psb27) & original...	0.03	OrthoFinder output from all 47 species
Smo77713	PSB27	Photosynthesis.photophosphorylation.photosystem...	0.11	OrthoFinder output from all 47 species
Solyc07g054290.1.1	PSB27, Solyc07g054290	Psb27 protein involved in PS-II assembly	0.15	OrthoFinder output from all 47 species
Spa_g04006	PSB27	protein involved in PS-II assembly *(Psb27) & original...	0.1	OrthoFinder output from all 47 species
Spa_g04007	PSB27	protein involved in PS-II assembly *(Psb27) & original...	0.14	OrthoFinder output from all 47 species
Spa_g05331	PSB27	protein involved in PS-II assembly *(Psb27) & original...	0.13	OrthoFinder output from all 47 species
Spa_g05332	PSB27	protein involved in PS-II assembly *(Psb27) & original...	0.09	OrthoFinder output from all 47 species
Tin_g00234	PSB27	protein involved in PS-II assembly *(Psb27) & original...	0.16	OrthoFinder output from all 47 species
Zm00001e001572_P001	PSB27, Zm00001e001572	Psb27 protein involved in PS-II assembly	0.17	OrthoFinder output from all 47 species
Zm00001e038249_P001	PSB27, Zm00001e038249	Psb27 protein involved in PS-II assembly	0.23	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010207	photosystem II assembly	IEA	Interproscan
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0043933	protein-containing complex organization	None	Extended
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEP	HCCA
MF	GO:0005215	transporter activity	IEP	HCCA
MF	GO:0005216	monoatomic ion channel activity	IEP	HCCA
MF	GO:0005261	monoatomic cation channel activity	IEP	HCCA
MF	GO:0005507	copper ion binding	IEP	HCCA
CC	GO:0005575	cellular_component	IEP	HCCA
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0006163	purine nucleotide metabolic process	IEP	HCCA
BP	GO:0006164	purine nucleotide biosynthetic process	IEP	HCCA
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	HCCA
BP	GO:0006753	nucleoside phosphate metabolic process	IEP	HCCA
BP	GO:0006754	ATP biosynthetic process	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
BP	GO:0008152	metabolic process	IEP	HCCA
MF	GO:0008324	monoatomic cation transmembrane transporter activity	IEP	HCCA
BP	GO:0009058	biosynthetic process	IEP	HCCA
BP	GO:0009117	nucleotide metabolic process	IEP	HCCA
BP	GO:0009141	nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009142	nucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009144	purine nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009145	purine nucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009150	purine ribonucleotide metabolic process	IEP	HCCA
BP	GO:0009152	purine ribonucleotide biosynthetic process	IEP	HCCA
BP	GO:0009165	nucleotide biosynthetic process	IEP	HCCA
BP	GO:0009199	ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009201	ribonucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009206	purine ribonucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009259	ribonucleotide metabolic process	IEP	HCCA
BP	GO:0009260	ribonucleotide biosynthetic process	IEP	HCCA
CC	GO:0009507	chloroplast	IEP	HCCA
CC	GO:0009512	cytochrome b6f complex	IEP	HCCA
CC	GO:0009521	photosystem	IEP	HCCA
CC	GO:0009522	photosystem I	IEP	HCCA
CC	GO:0009523	photosystem II	IEP	HCCA
CC	GO:0009536	plastid	IEP	HCCA
CC	GO:0009538	photosystem I reaction center	IEP	HCCA
MF	GO:0015075	monoatomic ion transmembrane transporter activity	IEP	HCCA
MF	GO:0015078	proton transmembrane transporter activity	IEP	HCCA
MF	GO:0015252	proton channel activity	IEP	HCCA
MF	GO:0015267	channel activity	IEP	HCCA
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	HCCA
BP	GO:0015979	photosynthesis	IEP	HCCA
BP	GO:0015986	proton motive force-driven ATP synthesis	IEP	HCCA
MF	GO:0016620	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0016853	isomerase activity	IEP	HCCA
MF	GO:0016854	racemase and epimerase activity	IEP	HCCA
MF	GO:0016857	racemase and epimerase activity, acting on carbohydrates and derivatives	IEP	HCCA
MF	GO:0016874	ligase activity	IEP	HCCA
MF	GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	IEP	HCCA
BP	GO:0018130	heterocycle biosynthetic process	IEP	HCCA
BP	GO:0018208	peptidyl-proline modification	IEP	HCCA
BP	GO:0019438	aromatic compound biosynthetic process	IEP	HCCA
BP	GO:0019637	organophosphate metabolic process	IEP	HCCA
BP	GO:0019693	ribose phosphate metabolic process	IEP	HCCA
MF	GO:0022803	passive transmembrane transporter activity	IEP	HCCA
MF	GO:0022857	transmembrane transporter activity	IEP	HCCA
MF	GO:0022890	inorganic cation transmembrane transporter activity	IEP	HCCA
MF	GO:0030145	manganese ion binding	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
CC	GO:0033177	proton-transporting two-sector ATPase complex, proton-transporting domain	IEP	HCCA
CC	GO:0033178	proton-transporting two-sector ATPase complex, catalytic domain	IEP	HCCA
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	HCCA
BP	GO:0044237	cellular metabolic process	IEP	HCCA
BP	GO:0044249	cellular biosynthetic process	IEP	HCCA
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	HCCA
BP	GO:0044281	small molecule metabolic process	IEP	HCCA
CC	GO:0045261	proton-transporting ATP synthase complex, catalytic core F(1)	IEP	HCCA
CC	GO:0045263	proton-transporting ATP synthase complex, coupling factor F(o)	IEP	HCCA
BP	GO:0046034	ATP metabolic process	IEP	HCCA
BP	GO:0046390	ribose phosphate biosynthetic process	IEP	HCCA
BP	GO:0046483	heterocycle metabolic process	IEP	HCCA
MF	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism	IEP	HCCA
MF	GO:0051537	2 iron, 2 sulfur cluster binding	IEP	HCCA
BP	GO:0055086	nucleobase-containing small molecule metabolic process	IEP	HCCA
CC	GO:0070069	cytochrome complex	IEP	HCCA
BP	GO:0072521	purine-containing compound metabolic process	IEP	HCCA
BP	GO:0072522	purine-containing compound biosynthetic process	IEP	HCCA
BP	GO:0090407	organophosphate biosynthetic process	IEP	HCCA
CC	GO:0098796	membrane protein complex	IEP	HCCA
BP	GO:1901135	carbohydrate derivative metabolic process	IEP	HCCA
BP	GO:1901137	carbohydrate derivative biosynthetic process	IEP	HCCA
BP	GO:1901293	nucleoside phosphate biosynthetic process	IEP	HCCA
BP	GO:1901360	organic cyclic compound metabolic process	IEP	HCCA
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	HCCA
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	HCCA
BP	GO:1901576	organic substance biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR025585	PSII_Pbs27	115	276

External Links

No external refs found!

Mp3g19780.1 (PSB27)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation