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  5. Mp3g07770.1

Mp3g07770.1


Description : no hits & (original description: none)


Gene families : OG0002504 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002504_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp3g07770.1
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00242560 evm_27.TU.AmTr_v1... No description available 0.06 OrthoFinder output from all 47 species
AT5G20600 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.06 OrthoFinder output from all 47 species
Ala_g27956 No alias rRNA processing factor *(RRP1) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07663 No alias rRNA processing factor *(RRP1) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.20G073500.1 Ceric.20G073500 rRNA processing factor *(RRP1) & original description:... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020943.93 No alias No description available 0.04 OrthoFinder output from all 47 species
Cre01.g019200 No alias No description available 0.14 OrthoFinder output from all 47 species
Dac_g10546 No alias rRNA processing factor *(RRP1) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g40442 No alias rRNA processing factor *(RRP1) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g35947 No alias rRNA processing factor *(RRP1) & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g15089 No alias rRNA processing factor *(RRP1) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc07g017940.1.1 Solyc07g017940 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006364 rRNA processing IEA Interproscan
CC GO:0030688 preribosome, small subunit precursor IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP HCCA
MF GO:0004358 glutamate N-acetyltransferase activity IEP HCCA
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005732 sno(s)RNA-containing ribonucleoprotein complex IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006525 arginine metabolic process IEP HCCA
BP GO:0006526 arginine biosynthetic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008175 tRNA methyltransferase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0030488 tRNA methylation IEP HCCA
CC GO:0031515 tRNA (m1A) methyltransferase complex IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
BP GO:0032259 methylation IEP HCCA
CC GO:0034457 Mpp10 complex IEP HCCA
CC GO:0034708 methyltransferase complex IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
CC GO:0043527 tRNA methyltransferase complex IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR010301 RRP1 16 214
No external refs found!