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  5. Mp3g02010.1

Mp3g02010.1


Description : component APC5 of (APC/C)-dependent ubiquitination platform subcomplex


Gene families : OG0004795 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004795_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp3g02010.1

Target Alias Description ECC score Gene Family Method Actions
Ala_g16627 No alias component *(APC5) of (APC/C)-dependent ubiquitination... 0.03 OrthoFinder output from all 47 species
Cre01.g034650 No alias No description available 0.05 OrthoFinder output from all 47 species
Dcu_g15912 No alias component *(APC5) of (APC/C)-dependent ubiquitination... 0.03 OrthoFinder output from all 47 species
GSVIVT01020836001 No alias Cell cycle.mitosis and meiosis.metaphase to anaphase... 0.03 OrthoFinder output from all 47 species
Ore_g30303 No alias component *(APC5) of (APC/C)-dependent ubiquitination... 0.02 OrthoFinder output from all 47 species
Sam_g26228 No alias component *(APC5) of (APC/C)-dependent ubiquitination... 0.02 OrthoFinder output from all 47 species
Smo104828 No alias Cell cycle.mitosis and meiosis.metaphase to anaphase... 0.04 OrthoFinder output from all 47 species
Solyc08g067190.4.1 Solyc08g067190 component APC5 of (APC/C)-dependent ubiquitination... 0.06 OrthoFinder output from all 47 species
Tin_g02150 No alias component *(APC5) of (APC/C)-dependent ubiquiTination... 0.03 OrthoFinder output from all 47 species
Zm00001e017305_P002 Zm00001e017305 component APC5 of (APC/C)-dependent ubiquitination... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
CC GO:0000152 nuclear ubiquitin ligase complex IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
CC GO:0005680 anaphase-promoting complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
MF GO:0043015 gamma-tubulin binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR026000 Apc5_dom 310 409
No external refs found!