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  5. Mp2g12880.1

Mp2g12880.1 (FIB1, ATFIB1, ATFBR1,...)


Aliases : FIB1, ATFIB1, ATFBR1, FBR1, SKIP7

Description : methyltransferase component Nop1/fibrillarin of snoRNP rRNA methylation complex


Gene families : OG0004335 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004335_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp2g12880.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00218020 FIB1, ATFIB1,... RNA processing.RNA modification.rRNA/tRNA... 0.04 OrthoFinder output from all 47 species
AMTR_s00099p00093470 FIB1, ATFIB1,... RNA processing.RNA modification.rRNA/tRNA... 0.03 OrthoFinder output from all 47 species
AT4G25630 FIB2, ATFIB2 fibrillarin 2 0.06 OrthoFinder output from all 47 species
AT5G52470 FIB1, ATFIB1,... fibrillarin 1 0.05 OrthoFinder output from all 47 species
Ala_g04107 FIB2, ATFIB2 methyltransferase component *(Nop1/fibrillarin) of... 0.03 OrthoFinder output from all 47 species
Aop_g18685 FIB1, ATFIB1,... methyltransferase component *(Nop1/fibrillarin) of... 0.04 OrthoFinder output from all 47 species
Aspi01Gene12556.t1 FIB1, ATFIB1,... methyltransferase component *(Nop1/fibrillarin) of... 0.03 OrthoFinder output from all 47 species
Aspi01Gene46159.t1 FIB1, ATFIB1,... methyltransferase component *(Nop1/fibrillarin) of... 0.02 OrthoFinder output from all 47 species
Azfi_s0093.g043290 FIB2, ATFIB2 not classified & original description: CDS=212-970 0.05 OrthoFinder output from all 47 species
Cba_g27536 FIB2, ATFIB2 methyltransferase component *(Nop1/fibrillarin) of... 0.02 OrthoFinder output from all 47 species
Ceric.01G068400.1 FIB1, ATFIB1,... methyltransferase component *(Nop1/fibrillarin) of... 0.03 OrthoFinder output from all 47 species
Ceric.02G070500.1 FIB1, ATFIB1,... methyltransferase component *(Nop1/fibrillarin) of... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001049.16 FIB1, ATFIB1,... RNA processing.RNA modification.rRNA/tRNA... 0.1 OrthoFinder output from all 47 species
Cre02.g077300 FIB2, ATFIB2 RNA processing.RNA modification.rRNA/tRNA... 0.09 OrthoFinder output from all 47 species
Dac_g15986 FIB1, ATFIB1,... methyltransferase component *(Nop1/fibrillarin) of... 0.05 OrthoFinder output from all 47 species
Dcu_g15289 FIB2, ATFIB2 methyltransferase component *(Nop1/fibrillarin) of... 0.04 OrthoFinder output from all 47 species
GSVIVT01028887001 FIB1, ATFIB1,... RNA processing.RNA modification.rRNA/tRNA... 0.03 OrthoFinder output from all 47 species
Gb_33899 FIB2, ATFIB2 methyltransferase component Nop1/fibrillarin of snoRNP... 0.03 OrthoFinder output from all 47 species
LOC_Os05g08360.1 FIB1, ATFIB1,... methyltransferase component Nop1/fibrillarin of snoRNP... 0.02 OrthoFinder output from all 47 species
Len_g49993 FIB2, ATFIB2 methyltransferase component *(Nop1/fibrillarin) of... 0.02 OrthoFinder output from all 47 species
MA_124463g0010 FIB2, ATFIB2 methyltransferase component Nop1/fibrillarin of snoRNP... 0.03 OrthoFinder output from all 47 species
Msp_g29062 FIB1, ATFIB1,... methyltransferase component *(Nop1/fibrillarin) of... 0.02 OrthoFinder output from all 47 species
Nbi_g41181 FIB2, ATFIB2 methyltransferase component *(Nop1/fibrillarin) of... 0.02 OrthoFinder output from all 47 species
Pir_g60296 FIB1, ATFIB1,... methyltransferase component *(Nop1/fibrillarin) of... 0.03 OrthoFinder output from all 47 species
Pp3c16_12410V3.1 FIB2, ATFIB2,... fibrillarin 2 0.03 OrthoFinder output from all 47 species
Pp3c27_4160V3.1 FIB2, ATFIB2, Pp3c27_4160 fibrillarin 2 0.03 OrthoFinder output from all 47 species
Pp3c6_12420V3.1 FIB2, ATFIB2, Pp3c6_12420 fibrillarin 2 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0065.g016024 FIB2, ATFIB2 not classified & original description: CDS=123-851 0.03 OrthoFinder output from all 47 species
Sam_g13274 No alias methyltransferase component *(Nop1/fibrillarin) of... 0.06 OrthoFinder output from all 47 species
Smo171051 FIB2, ATFIB2 RNA processing.RNA modification.rRNA/tRNA... 0.04 OrthoFinder output from all 47 species
Solyc03g025270.3.1 FIB2, ATFIB2,... methyltransferase component Nop1/fibrillarin of snoRNP... 0.04 OrthoFinder output from all 47 species
Spa_g31178 FIB2, ATFIB2 methyltransferase component *(Nop1/fibrillarin) of... 0.06 OrthoFinder output from all 47 species
Tin_g21591 FIB1, ATFIB1,... methyltransferase component *(Nop1/fibrillarin) of... 0.04 OrthoFinder output from all 47 species
Zm00001e023572_P001 FIB1, ATFIB1,... methyltransferase component Nop1/fibrillarin of snoRNP... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
BP GO:0006364 rRNA processing IEA Interproscan
MF GO:0008168 methyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004055 argininosuccinate synthase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006525 arginine metabolic process IEP HCCA
BP GO:0006526 arginine biosynthetic process IEP HCCA
BP GO:0006553 lysine metabolic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
BP GO:0009085 lysine biosynthetic process IEP HCCA
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043648 dicarboxylic acid metabolic process IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046451 diaminopimelate metabolic process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000692 Fibrillarin 73 303
No external refs found!