Description : no hits & (original description: none)
Gene families : OG0008626 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008626_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Mp2g11640.1 | |
Cluster | HCCA: Cluster_50 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00009p00260200 | evm_27.TU.AmTr_v1... | No description available | 0.05 | OrthoFinder output from all 47 species | |
AT1G12800 | No alias | Nucleic acid-binding, OB-fold-like protein | 0.09 | OrthoFinder output from all 47 species | |
Adi_g058535 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Aev_g12369 | No alias | not classified & original description: none | 0.1 | OrthoFinder output from all 47 species | |
Ala_g03977 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g16052 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aop_g04877 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Azfi_s0028.g023868 | No alias | not classified & original description: CDS=112-915 | 0.03 | OrthoFinder output from all 47 species | |
Cba_g07749 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ceric.34G040000.1 | Ceric.34G040000 | not classified & original description: pacid=50623148... | 0.08 | OrthoFinder output from all 47 species | |
Dcu_g09585 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Dde_g11903 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g02856 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01019806001 | No alias | No description available | 0.06 | OrthoFinder output from all 47 species | |
LOC_Os02g02390.1 | LOC_Os02g02390 | no hits & (original description: none) | 0.11 | OrthoFinder output from all 47 species | |
Len_g36057 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g04234 | No alias | not classified & original description: none | 0.09 | OrthoFinder output from all 47 species | |
Msp_g47512 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Nbi_g05908 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Pir_g65046 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0068.g016351 | No alias | delta-12/delta-15 fatty acid desaturase & original... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g17254 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Solyc08g007950.3.1 | Solyc08g007950 | no hits & (original description: none) | 0.09 | OrthoFinder output from all 47 species | |
Tin_g09536 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e013455_P001 | Zm00001e013455 | no hits & (original description: none) | 0.11 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
MF | GO:0002161 | aminoacyl-tRNA editing activity | IEP | HCCA |
MF | GO:0003690 | double-stranded DNA binding | IEP | HCCA |
MF | GO:0003824 | catalytic activity | IEP | HCCA |
MF | GO:0004366 | glycerol-3-phosphate O-acyltransferase activity | IEP | HCCA |
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
MF | GO:0004820 | glycine-tRNA ligase activity | IEP | HCCA |
MF | GO:0005524 | ATP binding | IEP | HCCA |
CC | GO:0005737 | cytoplasm | IEP | HCCA |
BP | GO:0006082 | organic acid metabolic process | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
BP | GO:0006426 | glycyl-tRNA aminoacylation | IEP | HCCA |
BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
MF | GO:0008374 | O-acyltransferase activity | IEP | HCCA |
CC | GO:0009507 | chloroplast | IEP | HCCA |
CC | GO:0009536 | plastid | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
MF | GO:0016874 | ligase activity | IEP | HCCA |
MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
BP | GO:0019752 | carboxylic acid metabolic process | IEP | HCCA |
MF | GO:0030247 | polysaccharide binding | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
MF | GO:0036094 | small molecule binding | IEP | HCCA |
BP | GO:0043038 | amino acid activation | IEP | HCCA |
BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
MF | GO:0043167 | ion binding | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
BP | GO:0043436 | oxoacid metabolic process | IEP | HCCA |
BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
MF | GO:0046422 | violaxanthin de-epoxidase activity | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
MF | GO:0052689 | carboxylic ester hydrolase activity | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
MF | GO:2001070 | starch binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR003029 | S1_domain | 821 | 892 |
No external refs found! |