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  5. Mp1g27590.1

Mp1g27590.1


Description : PPD1 protein involved in PS-I assembly


Gene families : OG0006534 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006534_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp1g27590.1
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
AT4G15510 No alias Photosystem II reaction center PsbP family protein 0.07 OrthoFinder output from all 47 species
Adi_g013844 No alias protein involved in PS-I assembly *(PPD1) & original... 0.04 OrthoFinder output from all 47 species
Ala_g08703 No alias protein involved in PS-I assembly *(PPD1) & original... 0.01 OrthoFinder output from all 47 species
Aop_g06568 No alias protein involved in PS-I assembly *(PPD1) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene47777.t1 Aspi01Gene47777 protein involved in PS-I assembly *(PPD1) & original... 0.05 OrthoFinder output from all 47 species
Ceric.27G030500.1 Ceric.27G030500 protein involved in PS-I assembly *(PPD1) & original... 0.03 OrthoFinder output from all 47 species
Cre08.g362900 No alias Photosynthesis.photophosphorylation.photosystem... 0.14 OrthoFinder output from all 47 species
Dac_g08500 No alias protein involved in PS-I assembly *(PPD1) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g37634 No alias protein involved in PS-I assembly *(PPD1) & original... 0.08 OrthoFinder output from all 47 species
Ehy_g18351 No alias protein involved in PS-I assembly *(PPD1) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01031268001 No alias Photosynthesis.photophosphorylation.photosystem... 0.06 OrthoFinder output from all 47 species
Gb_02226 No alias PPD1 protein involved in PS-I assembly 0.03 OrthoFinder output from all 47 species
LOC_Os07g17390.1 LOC_Os07g17390 PPD1 protein involved in PS-I assembly 0.13 OrthoFinder output from all 47 species
LOC_Os12g37710.1 LOC_Os12g37710 PPD1 protein involved in PS-I assembly 0.14 OrthoFinder output from all 47 species
Lfl_g08661 No alias protein involved in PS-I assembly *(PPD1) & original... 0.04 OrthoFinder output from all 47 species
MA_81231g0010 No alias PPD1 protein involved in PS-I assembly 0.06 OrthoFinder output from all 47 species
Msp_g26208 No alias protein involved in PS-I assembly *(PPD1) & original... 0.02 OrthoFinder output from all 47 species
Nbi_g19709 No alias protein involved in PS-I assembly *(PPD1) & original... 0.05 OrthoFinder output from all 47 species
Pir_g10011 No alias protein involved in PS-I assembly *(PPD1) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g08071 No alias protein involved in PS-I assembly *(PPD1) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g001177 No alias protein involved in PS-I assembly *(PPD1) & original... 0.06 OrthoFinder output from all 47 species
Sam_g20161 No alias protein involved in PS-I assembly *(PPD1) & original... 0.02 OrthoFinder output from all 47 species
Solyc01g106090.3.1 Solyc01g106090 PPD1 protein involved in PS-I assembly 0.08 OrthoFinder output from all 47 species
Spa_g12584 No alias protein involved in PS-I assembly *(PPD1) & original... 0.11 OrthoFinder output from all 47 species
Tin_g00363 No alias protein involved in PS-I assembly *(PPD1) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e002887_P002 Zm00001e002887 PPD1 protein involved in PS-I assembly 0.16 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
CC GO:0009523 photosystem II IEA Interproscan
CC GO:0009654 photosystem II oxygen evolving complex IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0019898 extrinsic component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004827 proline-tRNA ligase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006433 prolyl-tRNA aminoacylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR002683 PsbP_C 88 263
No external refs found!