1. Home
  2. Species
  3. Marchantia polymorpha
  4. Sequence
  5. Mp1g26360.1

Mp1g26360.1 (LPA2)


Aliases : LPA2

Description : LPA2 protein involved in PS-II assembly


Gene families : OG0007940 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007940_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp1g26360.1
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
Adi_g113721 LPA2 protein involved in PS-II assembly *(LPA2) & original... 0.06 OrthoFinder output from all 47 species
Ala_g11049 LPA2 protein involved in PS-II assembly *(LPA2) & original... 0.03 OrthoFinder output from all 47 species
Als_g10615 LPA2 protein involved in PS-II assembly *(LPA2) & original... 0.04 OrthoFinder output from all 47 species
Aob_g03834 No alias protein involved in PS-II assembly *(LPA2) & original... 0.06 OrthoFinder output from all 47 species
Azfi_s0264.g060919 LPA2 protein involved in PS-II assembly *(LPA2) & original... 0.05 OrthoFinder output from all 47 species
Cre02.g105650 No alias Photosynthesis.photophosphorylation.photosystem... 0.02 OrthoFinder output from all 47 species
Dac_g00467 LPA2 protein involved in PS-II assembly *(LPA2) & original... 0.04 OrthoFinder output from all 47 species
LOC_Os02g03250.1 LPA2, LOC_Os02g03250 LPA2 protein involved in PS-II assembly 0.03 OrthoFinder output from all 47 species
Pir_g09198 No alias bZIP class-G transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g33034 LPA2 protein involved in PS-II assembly *(LPA2) & original... 0.02 OrthoFinder output from all 47 species
Ppi_g62326 No alias protein involved in PS-II assembly *(LPA2) & original... 0.03 OrthoFinder output from all 47 species
Sam_g12946 No alias protein involved in PS-II assembly *(LPA2) & original... 0.02 OrthoFinder output from all 47 species
Solyc03g083570.3.1 LPA2, Solyc03g083570 LPA2 protein involved in PS-II assembly 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009536 plastid IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
MF GO:0046422 violaxanthin de-epoxidase activity IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!