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Description : ribonuclease (RNC1)
Gene families : OG0004387 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004387_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Mp1g04540.1 | |
| Cluster | HCCA: Cluster_50 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT4G37510 | No alias | Ribonuclease III family protein | 0.06 | OrthoFinder output from all 47 species | |
| Adi_g051860 | No alias | ribonuclease *(RNC1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g12300 | No alias | ribonuclease *(RNC1) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aob_g03344 | No alias | ribonuclease *(RNC1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g08305 | No alias | ribonuclease *(RNC1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene44351.t1 | Aspi01Gene44351 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g08197 | No alias | ribonuclease *(RNC1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.37G005400.1 | Ceric.37G005400 | ribonuclease *(RNC1) & original description:... | 0.12 | OrthoFinder output from all 47 species | |
| Dac_g12498 | No alias | ribonuclease *(RNC1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g14710 | No alias | ribonuclease *(RNC1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g30224 | No alias | ribonuclease *(RNC1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01000148001 | No alias | RNA processing.organelle machineries.RNA... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os01g59510.1 | LOC_Os01g59510 | ribonuclease (RNC1) | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g11243 | No alias | ribonuclease *(RNC1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| MA_10436489g0010 | No alias | ribonuclease (RNC1) | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g17999 | No alias | ribonuclease *(RNC1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g17066 | No alias | ribonuclease *(RNC1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g13594 | No alias | ribonuclease *(RNC1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g14760 | No alias | ribonuclease *(RNC1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc10g080040.3.1 | Solyc10g080040 | ribonuclease (RNC1) | 0.12 | OrthoFinder output from all 47 species | |
| Spa_g22190 | No alias | ribonuclease *(RNC1) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Zm00001e019511_P001 | Zm00001e019511 | ribonuclease (RNC1) | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003690 | double-stranded DNA binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0004540 | ribonuclease activity | IEP | HCCA |
| MF | GO:0004809 | tRNA (guanine-N2-)-methyltransferase activity | IEP | HCCA |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
| MF | GO:0004817 | cysteine-tRNA ligase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| MF | GO:0005542 | folic acid binding | IEP | HCCA |
| BP | GO:0006066 | alcohol metabolic process | IEP | HCCA |
| BP | GO:0006082 | organic acid metabolic process | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
| BP | GO:0006423 | cysteinyl-tRNA aminoacylation | IEP | HCCA |
| BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0008033 | tRNA processing | IEP | HCCA |
| MF | GO:0008168 | methyltransferase activity | IEP | HCCA |
| MF | GO:0008170 | N-methyltransferase activity | IEP | HCCA |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | HCCA |
| MF | GO:0008175 | tRNA methyltransferase activity | IEP | HCCA |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0016311 | dephosphorylation | IEP | HCCA |
| MF | GO:0016423 | tRNA (guanine) methyltransferase activity | IEP | HCCA |
| MF | GO:0016740 | transferase activity | IEP | HCCA |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | HCCA |
| MF | GO:0016782 | transferase activity, transferring sulphur-containing groups | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| BP | GO:0019751 | polyol metabolic process | IEP | HCCA |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0031406 | carboxylic acid binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0033218 | amide binding | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| MF | GO:0035596 | methylthiotransferase activity | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| BP | GO:0043038 | amino acid activation | IEP | HCCA |
| BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| MF | GO:0043177 | organic acid binding | IEP | HCCA |
| BP | GO:0043436 | oxoacid metabolic process | IEP | HCCA |
| BP | GO:0043647 | inositol phosphate metabolic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
| BP | GO:0044282 | small molecule catabolic process | IEP | HCCA |
| BP | GO:0046164 | alcohol catabolic process | IEP | HCCA |
| BP | GO:0046174 | polyol catabolic process | IEP | HCCA |
| BP | GO:0046434 | organophosphate catabolic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0046838 | phosphorylated carbohydrate dephosphorylation | IEP | HCCA |
| BP | GO:0046855 | inositol phosphate dephosphorylation | IEP | HCCA |
| MF | GO:0050497 | alkylthioltransferase activity | IEP | HCCA |
| MF | GO:0051539 | 4 iron, 4 sulfur cluster binding | IEP | HCCA |
| BP | GO:0071545 | inositol phosphate catabolic process | IEP | HCCA |
| MF | GO:0072341 | modified amino acid binding | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1901615 | organic hydroxy compound metabolic process | IEP | HCCA |
| BP | GO:1901616 | organic hydroxy compound catabolic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |