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  5. Zm00001e042077_P001

Zm00001e042077_P001 (PSAA, Zm00001e042077)


Aliases : PSAA, Zm00001e042077

Description : Photosystem I P700 chlorophyll a apoprotein A1 OS=Saccharum hybrid (sp|q6l398|psaa_sachy : 263.0)


Gene families : OG0001111 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001111_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e042077_P001
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00023p00250910 No alias Photosystem I P700 chlorophyll a apoprotein A1... 0.06 OrthoFinder output from all 47 species
AMTR_s00063p00185460 PSAA Photosystem I P700 chlorophyll a apoprotein A1... 0.06 OrthoFinder output from all 47 species
AMTR_s00076p00111250 PSAB Photosystem I P700 chlorophyll a apoprotein A2... 0.06 OrthoFinder output from all 47 species
AMTR_s00334p00015340 PSAA Photosystem I P700 chlorophyll a apoprotein A1... 0.06 OrthoFinder output from all 47 species
AMTR_s01196p00002960 PSAB Photosystem I P700 chlorophyll a apoprotein A2 OS=Morus indica 0.06 OrthoFinder output from all 47 species
ATCG00340 PSAB Photosystem I, PsaA/PsaB protein 0.13 OrthoFinder output from all 47 species
ATCG00350 PSAA Photosystem I, PsaA/PsaB protein 0.14 OrthoFinder output from all 47 species
Aev_g05542 PSAA apoprotein PsaA of PS-I complex & original description: none 0.11 OrthoFinder output from all 47 species
Als_g09461 PSAA apoprotein PsaA of PS-I complex & original description: none 0.07 OrthoFinder output from all 47 species
Als_g27956 PSAB not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g07701 PSAA apoprotein PsaA of PS-I complex & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g16004 PSAB apoprotein PsaB of PS-I complex & original description: none 0.07 OrthoFinder output from all 47 species
Ceric.02G013200.1 PSAB, Ceric.02G013200 apoprotein PsaB of PS-I complex & original description:... 0.08 OrthoFinder output from all 47 species
Ceric.02G013300.1 PSAA, Ceric.02G013300 not classified & original description: pacid=50585842... 0.1 OrthoFinder output from all 47 species
Ceric.02G015700.1 PSAB, Ceric.02G015700 not classified & original description: pacid=50585896... 0.12 OrthoFinder output from all 47 species
Ceric.04G104200.1 PSAB, Ceric.04G104200 apoprotein PsaB of PS-I complex & original description:... 0.09 OrthoFinder output from all 47 species
Ceric.09G047700.1 PSAB, Ceric.09G047700 apoprotein PsaB of PS-I complex & original description:... 0.13 OrthoFinder output from all 47 species
Ceric.09G047800.1 PSAA, Ceric.09G047800 apoprotein PsaA of PS-I complex & original description:... 0.06 OrthoFinder output from all 47 species
Ceric.1Z022700.1 PSAB, Ceric.1Z022700 not classified & original description: pacid=50586378... 0.09 OrthoFinder output from all 47 species
Ceric.23G081400.1 PSAB, Ceric.23G081400 not classified & original description: pacid=50610997... 0.04 OrthoFinder output from all 47 species
Ceric.31G008700.1 PSAA, Ceric.31G008700 not classified & original description: pacid=50575048... 0.11 OrthoFinder output from all 47 species
Ceric.32G035400.1 PSAB, Ceric.32G035400 not classified & original description: pacid=50597300... 0.06 OrthoFinder output from all 47 species
Ceric.32G035600.1 PSAB, Ceric.32G035600 not classified & original description: pacid=50597464... 0.04 OrthoFinder output from all 47 species
Ceric.33G023600.1 PSAA, Ceric.33G023600 not classified & original description: pacid=50606362... 0.07 OrthoFinder output from all 47 species
Ceric.38G009600.1 PSAB, Ceric.38G009600 not classified & original description: pacid=50579849... 0.11 OrthoFinder output from all 47 species
Dcu_g20890 PSAB apoprotein PsaB of PS-I complex & original description: none 0.11 OrthoFinder output from all 47 species
Dcu_g23259 PSAA apoprotein PsaA of PS-I complex & original description: none 0.1 OrthoFinder output from all 47 species
Ehy_g13659 PSAB not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01009295001 PSAB Photosystem I P700 chlorophyll a apoprotein A2 OS=Vitis vinifera 0.05 OrthoFinder output from all 47 species
GSVIVT01017483001 PSAB Photosystem I P700 chlorophyll a apoprotein A2 OS=Vitis vinifera 0.05 OrthoFinder output from all 47 species
GSVIVT01017484001 No alias Photosystem I P700 chlorophyll a apoprotein A1 OS=Populus alba 0.05 OrthoFinder output from all 47 species
GSVIVT01023733001 PSAA Photosystem I P700 chlorophyll a apoprotein A1... 0.05 OrthoFinder output from all 47 species
Gb_09026 PSAA Photosystem I P700 chlorophyll a apoprotein A1... 0.1 OrthoFinder output from all 47 species
Gb_11361 PSAA Photosystem I P700 chlorophyll a apoprotein A1... 0.12 OrthoFinder output from all 47 species
Gb_11944 PSAB Photosystem I P700 chlorophyll a apoprotein A2 OS=Cycas... 0.11 OrthoFinder output from all 47 species
Gb_20142 PSAA Photosystem I P700 chlorophyll a apoprotein A1... 0.03 OrthoFinder output from all 47 species
Gb_41658 No alias Photosystem I P700 chlorophyll a apoprotein A1... 0.05 OrthoFinder output from all 47 species
LOC_Os01g57962.1 PSAB, LOC_Os01g57962 apoprotein PsaB of PS-I complex 0.14 OrthoFinder output from all 47 species
LOC_Os01g57964.1 PSAA, LOC_Os01g57964 apoprotein PsaA of PS-I complex 0.11 OrthoFinder output from all 47 species
LOC_Os04g16760.1 PSAA, LOC_Os04g16760 apoprotein PsaA of PS-I complex 0.16 OrthoFinder output from all 47 species
LOC_Os05g01675.1 PSAA, LOC_Os05g01675 apoprotein PsaA of PS-I complex 0.17 OrthoFinder output from all 47 species
LOC_Os10g21248.1 PSAB, LOC_Os10g21248 apoprotein PsaB of PS-I complex 0.02 OrthoFinder output from all 47 species
LOC_Os10g21250.1 PSAA, LOC_Os10g21250 apoprotein PsaA of PS-I complex 0.16 OrthoFinder output from all 47 species
LOC_Os10g38229.1 PSAA, LOC_Os10g38229 apoprotein PsaA of PS-I complex 0.18 OrthoFinder output from all 47 species
LOC_Os10g38234.1 PSAB, LOC_Os10g38234 apoprotein PsaB of PS-I complex 0.18 OrthoFinder output from all 47 species
Lfl_g07434 PSAB apoprotein PsaB of PS-I complex & original description: none 0.1 OrthoFinder output from all 47 species
Lfl_g13216 PSAA apoprotein PsaA of PS-I complex & original description: none 0.1 OrthoFinder output from all 47 species
MA_103963g0010 PSAA Photosystem I P700 chlorophyll a apoprotein A1 OS=Pinus... 0.02 OrthoFinder output from all 47 species
Mp1g07160.1 PSAB Photosystem I P700 chlorophyll a apoprotein A2... 0.05 OrthoFinder output from all 47 species
Mp1g16220.1 PSAA Photosystem I P700 chlorophyll a apoprotein A1... 0.04 OrthoFinder output from all 47 species
Mp3g20630.1 PSAA Photosystem I P700 chlorophyll a apoprotein A1... 0.05 OrthoFinder output from all 47 species
Nbi_g01504 PSAB apoprotein PsaB of PS-I complex & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g01818 PSAA apoprotein PsaA of PS-I complex & original description: none 0.12 OrthoFinder output from all 47 species
Ore_g09869 PSAB apoprotein PsaB of PS-I complex & original description: none 0.12 OrthoFinder output from all 47 species
Pir_g04329 PSAB apoprotein PsaB of PS-I complex & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g09828 PSAA apoprotein PsaA of PS-I complex & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g01754 PSAA apoprotein PsaA of PS-I complex & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g09142 PSAB apoprotein PsaB of PS-I complex & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c22_5990V3.1 Pp3c22_5990 Photosystem I, PsaA/PsaB protein 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002247 PSAB not classified & original description: CDS=1-762 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0528.g027465 PSAB component *(uS14c) of small plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Sam_g01756 No alias apoprotein PsaB of PS-I complex & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g14789 No alias apoprotein PsaA of PS-I complex & original description: none 0.06 OrthoFinder output from all 47 species
Smo236842 PSAA Photosynthesis.photophosphorylation.photosystem I.PS-I... 0.13 OrthoFinder output from all 47 species
Solyc00g500056.1.1 PSAB, Solyc00g500056 apoprotein PsaB of PS-I complex 0.12 OrthoFinder output from all 47 species
Solyc00g500057.1.1 PSAA, Solyc00g500057 apoprotein PsaA of PS-I complex 0.12 OrthoFinder output from all 47 species
Solyc00g500138.1.1 PSAB, Solyc00g500138 apoprotein PsaB of PS-I complex 0.12 OrthoFinder output from all 47 species
Solyc00g500208.1.1 PSAB, Solyc00g500208 apoprotein PsaB of PS-I complex 0.12 OrthoFinder output from all 47 species
Solyc00g500209.1.1 PSAA, Solyc00g500209 apoprotein PsaA of PS-I complex 0.12 OrthoFinder output from all 47 species
Solyc05g020010.1.1 PSAB, Solyc05g020010 Photosystem I P700 chlorophyll a apoprotein A2... 0.03 OrthoFinder output from all 47 species
Solyc06g009940.1.1 PSAA, Solyc06g009940 Photosystem I P700 chlorophyll a apoprotein A1 OS=Morus... 0.12 OrthoFinder output from all 47 species
Solyc07g021250.1.1 PSAB, Solyc07g021250 Photosystem I P700 chlorophyll a apoprotein A2... 0.02 OrthoFinder output from all 47 species
Solyc12g035580.1.1 PSAB, Solyc12g035580 Photosystem I P700 chlorophyll a apoprotein A2... 0.05 OrthoFinder output from all 47 species
Spa_g04697 PSAB apoprotein PsaB of PS-I complex & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g03556 PSAA apoprotein PsaA of PS-I complex & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0009579 thylakoid IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
BP GO:0009767 photosynthetic electron transport chain IEP HCCA
BP GO:0009772 photosynthetic electron transport in photosystem II IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
MF GO:0016168 chlorophyll binding IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019684 photosynthesis, light reaction IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
MF GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity IEP HCCA
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR001280 PSI_PsaA/B 32 126
No external refs found!