Coexpression cluster: Cluster_41 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0009579 thylakoid 23.53% (12/51) 9.35 0.0 0.0
GO:0006754 ATP biosynthetic process 23.53% (12/51) 8.35 0.0 0.0
GO:0009145 purine nucleoside triphosphate biosynthetic process 23.53% (12/51) 8.35 0.0 0.0
GO:0009142 nucleoside triphosphate biosynthetic process 23.53% (12/51) 8.35 0.0 0.0
GO:0009206 purine ribonucleoside triphosphate biosynthetic process 23.53% (12/51) 8.35 0.0 0.0
GO:0009201 ribonucleoside triphosphate biosynthetic process 23.53% (12/51) 8.35 0.0 0.0
GO:0015986 proton motive force-driven ATP synthesis 23.53% (12/51) 8.45 0.0 0.0
GO:0009152 purine ribonucleotide biosynthetic process 23.53% (12/51) 7.97 0.0 0.0
GO:0046390 ribose phosphate biosynthetic process 23.53% (12/51) 7.97 0.0 0.0
GO:0009260 ribonucleotide biosynthetic process 23.53% (12/51) 7.97 0.0 0.0
GO:0015979 photosynthesis 25.49% (13/51) 7.35 0.0 0.0
GO:0006164 purine nucleotide biosynthetic process 23.53% (12/51) 7.61 0.0 0.0
GO:0072522 purine-containing compound biosynthetic process 23.53% (12/51) 7.56 0.0 0.0
GO:0009165 nucleotide biosynthetic process 23.53% (12/51) 7.3 0.0 0.0
GO:1901293 nucleoside phosphate biosynthetic process 23.53% (12/51) 7.3 0.0 0.0
GO:1901137 carbohydrate derivative biosynthetic process 23.53% (12/51) 7.15 0.0 0.0
GO:0009199 ribonucleoside triphosphate metabolic process 23.53% (12/51) 7.03 0.0 0.0
GO:0009144 purine nucleoside triphosphate metabolic process 23.53% (12/51) 7.03 0.0 0.0
GO:0009205 purine ribonucleoside triphosphate metabolic process 23.53% (12/51) 7.03 0.0 0.0
GO:0046034 ATP metabolic process 23.53% (12/51) 7.03 0.0 0.0
GO:0009141 nucleoside triphosphate metabolic process 23.53% (12/51) 6.95 0.0 0.0
GO:0044237 cellular metabolic process 58.82% (30/51) 3.08 0.0 0.0
GO:0009259 ribonucleotide metabolic process 23.53% (12/51) 6.7 0.0 0.0
GO:0009150 purine ribonucleotide metabolic process 23.53% (12/51) 6.7 0.0 0.0
GO:0019693 ribose phosphate metabolic process 23.53% (12/51) 6.7 0.0 0.0
GO:0006163 purine nucleotide metabolic process 23.53% (12/51) 6.5 0.0 0.0
GO:0090407 organophosphate biosynthetic process 23.53% (12/51) 6.49 0.0 0.0
GO:0072521 purine-containing compound metabolic process 23.53% (12/51) 6.47 0.0 0.0
GO:0009117 nucleotide metabolic process 23.53% (12/51) 6.34 0.0 0.0
GO:0006753 nucleoside phosphate metabolic process 23.53% (12/51) 6.29 0.0 0.0
GO:0055086 nucleobase-containing small molecule metabolic process 23.53% (12/51) 6.09 0.0 0.0
GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) 13.73% (7/51) 9.02 0.0 0.0
GO:1901135 carbohydrate derivative metabolic process 23.53% (12/51) 5.84 0.0 0.0
GO:0034654 nucleobase-containing compound biosynthetic process 23.53% (12/51) 5.8 0.0 0.0
GO:0008152 metabolic process 58.82% (30/51) 2.61 0.0 0.0
GO:0019637 organophosphate metabolic process 23.53% (12/51) 5.58 0.0 0.0
GO:0009987 cellular process 58.82% (30/51) 2.5 0.0 0.0
GO:0019438 aromatic compound biosynthetic process 23.53% (12/51) 5.42 0.0 0.0
GO:0018130 heterocycle biosynthetic process 23.53% (12/51) 5.4 0.0 0.0
GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain 13.73% (7/51) 8.09 0.0 0.0
GO:1901362 organic cyclic compound biosynthetic process 23.53% (12/51) 5.21 0.0 0.0
GO:0043232 intracellular non-membrane-bounded organelle 23.53% (12/51) 4.83 0.0 0.0
GO:0043228 non-membrane-bounded organelle 23.53% (12/51) 4.83 0.0 0.0
GO:0005575 cellular_component 41.18% (21/51) 2.94 0.0 0.0
GO:0019684 photosynthesis, light reaction 9.8% (5/51) 8.99 0.0 0.0
GO:0044281 small molecule metabolic process 23.53% (12/51) 4.49 0.0 0.0
GO:0009767 photosynthetic electron transport chain 9.8% (5/51) 8.82 0.0 0.0
GO:0015078 proton transmembrane transporter activity 13.73% (7/51) 6.81 0.0 0.0
GO:1901566 organonitrogen compound biosynthetic process 23.53% (12/51) 4.27 0.0 0.0
GO:0098796 membrane protein complex 17.65% (9/51) 5.35 0.0 0.0
GO:0044271 cellular nitrogen compound biosynthetic process 23.53% (12/51) 4.14 0.0 0.0
GO:0008150 biological_process 58.82% (30/51) 1.84 0.0 0.0
GO:0009772 photosynthetic electron transport in photosystem II 7.84% (4/51) 9.35 0.0 0.0
GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity 7.84% (4/51) 9.35 0.0 0.0
GO:0022900 electron transport chain 9.8% (5/51) 7.99 0.0 0.0
GO:0006139 nucleobase-containing compound metabolic process 23.53% (12/51) 3.95 0.0 0.0
GO:0043226 organelle 23.53% (12/51) 3.93 0.0 0.0
GO:0043229 intracellular organelle 23.53% (12/51) 3.93 0.0 0.0
GO:0046483 heterocycle metabolic process 23.53% (12/51) 3.77 0.0 0.0
GO:0006725 cellular aromatic compound metabolic process 23.53% (12/51) 3.77 0.0 0.0
GO:1901360 organic cyclic compound metabolic process 23.53% (12/51) 3.72 0.0 0.0
GO:0044249 cellular biosynthetic process 23.53% (12/51) 3.61 0.0 0.0
GO:1901576 organic substance biosynthetic process 23.53% (12/51) 3.5 0.0 0.0
GO:0022890 inorganic cation transmembrane transporter activity 13.73% (7/51) 5.3 0.0 0.0
GO:0008324 monoatomic cation transmembrane transporter activity 13.73% (7/51) 5.22 0.0 0.0
GO:0009058 biosynthetic process 23.53% (12/51) 3.37 0.0 0.0
GO:0015318 inorganic molecular entity transmembrane transporter activity 13.73% (7/51) 5.05 0.0 0.0
GO:0034641 cellular nitrogen compound metabolic process 23.53% (12/51) 3.26 0.0 0.0
GO:0015075 monoatomic ion transmembrane transporter activity 13.73% (7/51) 4.81 0.0 0.0
GO:0006091 generation of precursor metabolites and energy 9.8% (5/51) 5.99 0.0 0.0
GO:0032991 protein-containing complex 17.65% (9/51) 3.67 0.0 0.0
GO:0006796 phosphate-containing compound metabolic process 23.53% (12/51) 2.79 0.0 0.0
GO:0006793 phosphorus metabolic process 23.53% (12/51) 2.79 0.0 0.0
GO:0110165 cellular anatomical entity 25.49% (13/51) 2.6 0.0 0.0
GO:0022857 transmembrane transporter activity 13.73% (7/51) 3.18 1.1e-05 1.4e-05
GO:0005215 transporter activity 13.73% (7/51) 3.16 1.3e-05 1.5e-05
GO:0009055 electron transfer activity 7.84% (4/51) 4.52 2.9e-05 3.5e-05
GO:1901564 organonitrogen compound metabolic process 23.53% (12/51) 1.98 3.6e-05 4.3e-05
GO:0006807 nitrogen compound metabolic process 23.53% (12/51) 1.74 0.000173 0.000203
GO:0044238 primary metabolic process 23.53% (12/51) 1.45 0.001064 0.001237
GO:0071704 organic substance metabolic process 23.53% (12/51) 1.39 0.001544 0.001773
GO:0009521 photosystem 3.92% (2/51) 5.06 0.001672 0.001896
GO:0016168 chlorophyll binding 1.96% (1/51) 8.09 0.003676 0.004118
GO:0009539 photosystem II reaction center 1.96% (1/51) 6.86 0.008556 0.009472
GO:0009523 photosystem II 1.96% (1/51) 4.67 0.03853 0.042157
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Abrodictyum obscurum HCCA Cluster_9 0.075 OrthoFinder output from all 47 species Compare
Angiopteris evecta HCCA Cluster_60 0.075 OrthoFinder output from all 47 species Compare
Adiantum latifolium HCCA Cluster_142 0.02 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_182 0.083 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_25 0.029 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_87 0.095 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_24 0.056 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_26 0.039 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_38 0.017 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_42 0.037 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_43 0.078 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_45 0.021 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_59 0.015 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_68 0.016 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_69 0.016 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_82 0.024 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_89 0.019 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_95 0.02 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_96 0.017 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_99 0.018 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_100 0.024 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_137 0.016 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_144 0.016 OrthoFinder output from all 47 species Compare
Diplazium proliferum (Lam.) Kaulf. HCCA Cluster_28 0.022 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_81 0.098 OrthoFinder output from all 47 species Compare
Equisetum hyemale HCCA Cluster_24 0.018 OrthoFinder output from all 47 species Compare
Equisetum hyemale HCCA Cluster_89 0.021 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_22 0.031 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_66 0.075 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_79 0.018 OrthoFinder output from all 47 species Compare
Lindsaea ensifolia HCCA Cluster_18 0.019 OrthoFinder output from all 47 species Compare
Lindsaea ensifolia HCCA Cluster_175 0.087 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_27 0.041 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_28 0.033 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_161 0.018 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_31 0.042 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_7 0.068 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_121 0.087 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_212 0.015 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_92 0.017 OrthoFinder output from all 47 species Compare
Physcomitrella patens HCCA Cluster_45 0.016 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_17 0.056 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_83 0.068 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_151 0.017 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_31 0.045 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_2 0.02 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_3 0.028 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_4 0.14 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_5 0.029 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_89 0.036 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_90 0.029 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_127 0.015 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_138 0.016 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_26 0.096 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_80 0.025 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_207 0.053 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_30 0.027 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_25 0.018 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_27 0.028 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_94 0.017 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_116 0.017 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_74 0.092 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_108 0.032 OrthoFinder output from all 47 species Compare
Sequences (51) (download table)

InterPro Domains

GO Terms

Family Terms