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  5. Zm00001e040649_P001

Zm00001e040649_P001 (Zm00001e040649)


Aliases : Zm00001e040649

Description : no hits & (original description: none)


Gene families : OG0003459 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003459_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e040649_P001

Target Alias Description ECC score Gene Family Method Actions
AT1G04140 No alias Transducin family protein / WD-40 repeat family protein 0.09 OrthoFinder output from all 47 species
AT5G43930 No alias Transducin family protein / WD-40 repeat family protein 0.03 OrthoFinder output from all 47 species
Adi_g060201 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g114851 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g09303 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34304.t1 Aspi01Gene34304 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0061.g034941 No alias not classified & original description: CDS=353-2881 0.05 OrthoFinder output from all 47 species
Cba_g72126 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.25G076900.1 Ceric.25G076900 not classified & original description: pacid=50594585... 0.08 OrthoFinder output from all 47 species
Cre16.g655400 No alias No description available 0.01 OrthoFinder output from all 47 species
Dcu_g47211 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g03979 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g30420 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01001859001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01028455001 No alias No description available 0.05 OrthoFinder output from all 47 species
Gb_28988 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g18820.2 LOC_Os02g18820 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Lfl_g03437 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g09170 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g16849 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0075.g017365 No alias not classified & original description: CDS=380-3100 0.02 OrthoFinder output from all 47 species
Sam_g27650 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g27651 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo413471 No alias No description available 0.04 OrthoFinder output from all 47 species
Tin_g12788 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005244 voltage-gated monoatomic ion channel activity IEP HCCA
MF GO:0005247 voltage-gated chloride channel activity IEP HCCA
MF GO:0005253 monoatomic anion channel activity IEP HCCA
MF GO:0005254 chloride channel activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
BP GO:0006821 chloride transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0007186 G protein-coupled receptor signaling pathway IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008308 voltage-gated monoatomic anion channel activity IEP HCCA
MF GO:0008509 monoatomic anion transmembrane transporter activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015108 chloride transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022832 voltage-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0034450 ubiquitin-ubiquitin ligase activity IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 146 185
IPR001680 WD40_repeat 119 142
No external refs found!