Zm00001e039942_P003 (SDG2, ATXR3, Zm00001e039942)


Aliases : SDG2, ATXR3, Zm00001e039942

Description : class III/Trithorax histone methyltransferase component of histone lysine methylation/demethylation


Gene families : OG0002791 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002791_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e039942_P003

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00043p00149000 SDG2, ATXR3,... Chromatin organisation.histone modifications.histone... 0.08 OrthoFinder output from all 47 species
AT4G15180 SDG2, ATXR3 SET domain protein 2 0.1 OrthoFinder output from all 47 species
Adi_g039581 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g065983 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g116452 SDG2, ATXR3 class-III histone methyltransferase *(Trx) & original... 0.08 OrthoFinder output from all 47 species
Aev_g14143 SDG2, ATXR3 class-III histone methyltransferase *(Trx) & original... 0.06 OrthoFinder output from all 47 species
Ala_g13000 SDG2, ATXR3 class-III histone methyltransferase *(Trx) & original... 0.15 OrthoFinder output from all 47 species
Als_g21633 SDG2, ATXR3 class-III histone methyltransferase *(Trx) & original... 0.1 OrthoFinder output from all 47 species
Aob_g28999 SDG2, ATXR3 class-III histone methyltransferase *(Trx) & original... 0.12 OrthoFinder output from all 47 species
Aop_g29882 SDG2, ATXR3 class-III histone methyltransferase *(Trx) & original... 0.07 OrthoFinder output from all 47 species
Aspi01Gene24078.t2 SDG2, ATXR3,... class-III histone methyltransferase *(Trx) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0043.g027108 SDG2, ATXR3 class-III histone methyltransferase *(Trx) & original... 0.06 OrthoFinder output from all 47 species
Azfi_s0296.g063535 SDG2, ATXR3 class-III histone methyltransferase *(Trx) & original... 0.03 OrthoFinder output from all 47 species
Cba_g33105 SDG2, ATXR3 class-III histone methyltransferase *(Trx) & original... 0.04 OrthoFinder output from all 47 species
Ceric.18G017200.1 SDG2, ATXR3,... class-III histone methyltransferase *(Trx) & original... 0.2 OrthoFinder output from all 47 species
Cre17.g742700 SDG2, ATXR3 Chromatin organisation.histone modifications.histone... 0.01 OrthoFinder output from all 47 species
Dac_g23370 SDG2, ATXR3 class-III histone methyltransferase *(Trx) & original... 0.04 OrthoFinder output from all 47 species
Dcu_g07181 SDG2, ATXR3 class-III histone methyltransferase *(Trx) & original... 0.13 OrthoFinder output from all 47 species
Dde_g26109 SDG2, ATXR3 class-III histone methyltransferase *(Trx) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g05119 SDG2, ATXR3 class-III histone methyltransferase *(Trx) & original... 0.07 OrthoFinder output from all 47 species
GSVIVT01030649001 SDG2, ATXR3 Chromatin organisation.histone modifications.histone... 0.19 OrthoFinder output from all 47 species
Gb_22849 SDG2, ATXR3 class III/Trithorax histone methyltransferase component... 0.02 OrthoFinder output from all 47 species
LOC_Os08g08210.1 SDG2, ATXR3,... class III/Trithorax histone methyltransferase component... 0.17 OrthoFinder output from all 47 species
Len_g14756 SDG2, ATXR3 class-III histone methyltransferase *(Trx) & original... 0.06 OrthoFinder output from all 47 species
Lfl_g02478 SDG2, ATXR3 class-III histone methyltransferase *(Trx) & original... 0.11 OrthoFinder output from all 47 species
MA_102811g0010 SDG2, ATXR3 class III/Trithorax histone methyltransferase component... 0.13 OrthoFinder output from all 47 species
MA_102811g0020 SDG2, ATXR3 class III/Trithorax histone methyltransferase component... 0.1 OrthoFinder output from all 47 species
Mp2g06500.1 SDG2, ATXR3 class III/Trithorax histone methyltransferase component... 0.14 OrthoFinder output from all 47 species
Msp_g15475 SDG2, ATXR3 class-III histone methyltransferase *(Trx) & original... 0.14 OrthoFinder output from all 47 species
Nbi_g03226 SDG2, ATXR3 class-III histone methyltransferase *(Trx) & original... 0.1 OrthoFinder output from all 47 species
Ore_g37217 SDG2, ATXR3 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g37849 SDG2, ATXR3 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g41517 SDG2, ATXR3 class-III histone methyltransferase *(Trx) & original... 0.07 OrthoFinder output from all 47 species
Pir_g65975 SDG2, ATXR3 class-III histone methyltransferase *(Trx) & original... 0.05 OrthoFinder output from all 47 species
Pnu_g23259 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g02428 SDG2, ATXR3 class-III histone methyltransferase *(Trx) & original... 0.1 OrthoFinder output from all 47 species
Sacu_v1.1_s0023.g008756 SDG2, ATXR3 class-III histone methyltransferase *(Trx) & original... 0.1 OrthoFinder output from all 47 species
Sam_g17455 No alias class-III histone methyltransferase *(Trx) & original... 0.09 OrthoFinder output from all 47 species
Smo432361 SDG2, ATXR3 Chromatin organisation.histone modifications.histone... 0.08 OrthoFinder output from all 47 species
Smo447947 SDG2, ATXR3 Chromatin organisation.histone modifications.histone... 0.12 OrthoFinder output from all 47 species
Solyc07g052940.4.1 SDG2, ATXR3,... class III/Trithorax histone methyltransferase component... 0.19 OrthoFinder output from all 47 species
Spa_g50988 SDG2, ATXR3 class-III histone methyltransferase *(Trx) & original... 0.07 OrthoFinder output from all 47 species
Tin_g09792 SDG2, ATXR3 class-III histone methyltransferase *(Trx) & original... 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
MF GO:0004197 cysteine-type endopeptidase activity IEP HCCA
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR001214 SET_dom 1775 1834
IPR025640 GYF_2 887 930
No external refs found!