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  5. Zm00001e029565_P001

Zm00001e029565_P001 (Zm00001e029565)


Aliases : Zm00001e029565

Description : UFM ligase E3 protein


Gene families : OG0004043 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004043_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e029565_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00034p00207810 evm_27.TU.AmTr_v1... Protein degradation.peptide... 0.03 OrthoFinder output from all 47 species
Aev_g06086 No alias E3 UFM ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g04668 No alias E3 UFM ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene37506.t1 Aspi01Gene37506 E3 UFM ubiquitin ligase & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g02692 No alias E3 UFM ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.36G053900.1 Ceric.36G053900 E3 UFM ubiquitin ligase & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g49240 No alias E3 UFM ubiquitin ligase & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g01606 No alias E3 UFM ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Gb_30282 No alias UFM ligase E3 protein 0.04 OrthoFinder output from all 47 species
LOC_Os05g02650.1 LOC_Os05g02650 UFM ligase E3 protein 0.06 OrthoFinder output from all 47 species
Len_g18994 No alias E3 UFM ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g12595 No alias E3 UFM ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Mp3g01510.1 No alias UFM ligase E3 protein 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010049 No alias E3 UFM ubiquitin ligase & original description: CDS=104-2596 0.02 OrthoFinder output from all 47 species
Smo113645 No alias Protein degradation.peptide... 0.02 OrthoFinder output from all 47 species
Solyc11g072950.3.1 Solyc11g072950 UFM ligase E3 protein 0.03 OrthoFinder output from all 47 species
Tin_g21748 No alias E3 UFM ubiquiTin ligase & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004819 glutamine-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006425 glutaminyl-tRNA aminoacylation IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR018611 Ufl1 4 288
No external refs found!