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  5. Zm00001e023510_P001

Zm00001e023510_P001 (Zm00001e023510)


Aliases : Zm00001e023510

Description : no hits & (original description: none)


Gene families : OG0004818 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004818_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e023510_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00224830 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AT1G63610 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.04 OrthoFinder output from all 47 species
Ala_g01440 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0173.g055763 No alias not classified & original description: CDS=96-1244 0.02 OrthoFinder output from all 47 species
Cba_g02472 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.31G070200.1 Ceric.31G070200 not classified & original description: pacid=50574155... 0.08 OrthoFinder output from all 47 species
Dac_g01405 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g02075 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g04571 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008675001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_39508 No alias no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Len_g27779 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g12828 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g07529 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g28557 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0022.g008683 No alias not classified & original description: CDS=1-438 0.07 OrthoFinder output from all 47 species
Sam_g49093 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Smo442874 No alias RNA biosynthesis.transcriptional activation.HRT... 0.04 OrthoFinder output from all 47 species
Solyc04g082310.3.1 Solyc04g082310 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g10436 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006553 lysine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0008837 diaminopimelate epimerase activity IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0009085 lysine biosynthetic process IEP HCCA
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016854 racemase and epimerase activity IEP HCCA
MF GO:0016855 racemase and epimerase activity, acting on amino acids and derivatives IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019751 polyol metabolic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0036361 racemase activity, acting on amino acids and derivatives IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043647 inositol phosphate metabolic process IEP HCCA
BP GO:0043648 dicarboxylic acid metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046164 alcohol catabolic process IEP HCCA
BP GO:0046174 polyol catabolic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046434 organophosphate catabolic process IEP HCCA
BP GO:0046451 diaminopimelate metabolic process IEP HCCA
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP HCCA
BP GO:0046855 inositol phosphate dephosphorylation IEP HCCA
MF GO:0047661 amino-acid racemase activity IEP HCCA
BP GO:0071545 inositol phosphate catabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901616 organic hydroxy compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR008479 DUF760 231 314
IPR008479 DUF760 82 163
No external refs found!