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  5. Zm00001e023389_P002

Zm00001e023389_P002 (Zm00001e023389)


Aliases : Zm00001e023389

Description : Clustered mitochondria protein OS=Arabidopsis thaliana (sp|f4j5s1|clu_arath : 1500.0)


Gene families : OG0004309 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004309_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e023389_P002

Target Alias Description ECC score Gene Family Method Actions
AT3G52140 No alias tetratricopeptide repeat (TPR)-containing protein 0.11 OrthoFinder output from all 47 species
Adi_g016400 No alias regulatory protein *(FRIENDLY) of mitochondrion division... 0.02 OrthoFinder output from all 47 species
Aspi01Gene25622.t1 Aspi01Gene25622 regulatory protein *(FRIENDLY) of mitochondrion division... 0.02 OrthoFinder output from all 47 species
Aspi01Gene25626.t2 Aspi01Gene25626 regulatory protein *(FRIENDLY) of mitochondrion division... 0.02 OrthoFinder output from all 47 species
Azfi_s0017.g014488 No alias regulatory protein *(FRIENDLY) of mitochondrion division... 0.03 OrthoFinder output from all 47 species
Azfi_s0159.g053958 No alias regulatory protein *(FRIENDLY) of mitochondrion division... 0.03 OrthoFinder output from all 47 species
Ceric.02G073000.1 Ceric.02G073000 regulatory protein *(FRIENDLY) of mitochondrion division... 0.05 OrthoFinder output from all 47 species
Dcu_g04144 No alias regulatory protein *(FRIENDLY) of mitochondrion division... 0.04 OrthoFinder output from all 47 species
GSVIVT01032046001 No alias Clustered mitochondria protein OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
LOC_Os02g48620.2 LOC_Os02g48620 Clustered mitochondria protein OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
MA_10207074g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10427006g0010 No alias Clustered mitochondria protein OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_637565g0010 No alias Clustered mitochondria protein OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc01g086750.4.1 Solyc01g086750 Clustered mitochondria protein OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004826 phenylalanine-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006432 phenylalanyl-tRNA aminoacylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR028275 CLU_N 101 177
IPR007967 GSKIP_dom 259 329
IPR033646 CLU-central 767 948
IPR025697 CLU_dom 381 645
No external refs found!