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Aliases : Zm00001e022737
Description : component ZCCHC8 of Nuclear Exosome Targeting (NEXT) activation complex
Gene families : OG0004396 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004396_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Zm00001e022737_P001 | |
| Cluster | HCCA: Cluster_65 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g011434 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g13090 | No alias | component *(ZCCHC8) of Nuclear Exosome Targeting (NEXT)... | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0128.g048792 | No alias | component *(ZCCHC8) of Nuclear Exosome Targeting (NEXT)... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.12G021600.1 | Ceric.12G021600 | component *(ZCCHC8) of Nuclear Exosome Targeting (NEXT)... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g14866 | No alias | component *(ZCCHC8) of Nuclear Exosome Targeting (NEXT)... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_14574 | No alias | component ZCCHC8 of Nuclear Exosome Targeting (NEXT)... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os06g30020.1 | LOC_Os06g30020 | component ZCCHC8 of Nuclear Exosome Targeting (NEXT)... | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g21419 | No alias | component *(ZCCHC8) of Nuclear Exosome Targeting (NEXT)... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g23549 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g38534 | No alias | component *(ZCCHC8) of Nuclear Exosome Targeting (NEXT)... | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g20212 | No alias | component *(ZCCHC8) of Nuclear Exosome Targeting (NEXT)... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc03g045060.3.1 | Solyc03g045060 | component ZCCHC8 of Nuclear Exosome Targeting (NEXT)... | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g11945 | No alias | component *(ZCCHC8) of Nuclear Exosome TargeTing (NEXT)... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0002097 | tRNA wobble base modification | IEP | HCCA |
| BP | GO:0002098 | tRNA wobble uridine modification | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0004140 | dephospho-CoA kinase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006163 | purine nucleotide metabolic process | IEP | HCCA |
| BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006400 | tRNA modification | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006753 | nucleoside phosphate metabolic process | IEP | HCCA |
| BP | GO:0008033 | tRNA processing | IEP | HCCA |
| BP | GO:0009117 | nucleotide metabolic process | IEP | HCCA |
| BP | GO:0009150 | purine ribonucleotide metabolic process | IEP | HCCA |
| BP | GO:0009152 | purine ribonucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0009165 | nucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0009259 | ribonucleotide metabolic process | IEP | HCCA |
| BP | GO:0009260 | ribonucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0009451 | RNA modification | IEP | HCCA |
| BP | GO:0015936 | coenzyme A metabolic process | IEP | HCCA |
| BP | GO:0015937 | coenzyme A biosynthetic process | IEP | HCCA |
| BP | GO:0019693 | ribose phosphate metabolic process | IEP | HCCA |
| CC | GO:0033588 | elongator holoenzyme complex | IEP | HCCA |
| BP | GO:0033865 | nucleoside bisphosphate metabolic process | IEP | HCCA |
| BP | GO:0033866 | nucleoside bisphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0033875 | ribonucleoside bisphosphate metabolic process | IEP | HCCA |
| BP | GO:0034030 | ribonucleoside bisphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0034032 | purine nucleoside bisphosphate metabolic process | IEP | HCCA |
| BP | GO:0034033 | purine nucleoside bisphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0034470 | ncRNA processing | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| BP | GO:0046390 | ribose phosphate biosynthetic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0072521 | purine-containing compound metabolic process | IEP | HCCA |
| BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | HCCA |
| BP | GO:0090407 | organophosphate biosynthetic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
| BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | HCCA |
| BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR006568 | PSP_pro-rich | 316 | 353 |
| No external refs found! |