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  5. Zm00001e022192_P001

Zm00001e022192_P001 (Zm00001e022192)


Aliases : Zm00001e022192

Description : plant-specific E3 ubiquitin ligase (RSL/RFA)


Gene families : OG0000695 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000695_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e022192_P001
Cluster HCCA: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00129p00117090 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT2G25360 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
Aev_g40090 No alias plant-specific E3 ubiquitin ligase *(RSL/RFA) & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene12402.t1 Aspi01Gene12402 plant-specific E3 ubiquitin ligase *(RSL/RFA) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g05649 No alias plant-specific E3 ubiquitin ligase *(RSL/RFA) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g13555 No alias plant-specific E3 ubiquitin ligase *(RSL/RFA) & original... 0.03 OrthoFinder output from all 47 species
Gb_28418 No alias plant-specific E3 ubiquitin ligase (RSL/RFA) 0.02 OrthoFinder output from all 47 species
LOC_Os09g11170.1 LOC_Os09g11170 plant-specific E3 ubiquitin ligase (RSL/RFA) 0.03 OrthoFinder output from all 47 species
LOC_Os09g26470.1 LOC_Os09g26470 plant-specific E3 ubiquitin ligase (RSL/RFA) 0.03 OrthoFinder output from all 47 species
MA_10123705g0010 No alias plant-specific E3 ubiquitin ligase (RSL/RFA) 0.02 OrthoFinder output from all 47 species
Nbi_g08847 No alias plant-specific E3 ubiquitin ligase *(RSL/RFA) & original... 0.02 OrthoFinder output from all 47 species
Pnu_g06303 No alias plant-specific E3 ubiquitin ligase *(RSL/RFA) & original... 0.02 OrthoFinder output from all 47 species
Solyc09g064300.1.1 Solyc09g064300 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Tin_g09748 No alias plant-specific E3 ubiquiTin ligase *(RSL/RFA) & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002867 IBR_dom 172 217
IPR002867 IBR_dom 98 148
No external refs found!