Zm00001e022143_P002 (WRKY4, Zm00001e022143)

Aliases : WRKY4, Zm00001e022143

Description : transcription factor (WRKY)

Gene families : OG0000020 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e022143_P002
Cluster	HCCA: Cluster_137

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00023p00208940	WRKY4,...	RNA biosynthesis.transcriptional activation.WRKY...	0.04	OrthoFinder output from all 47 species
Adi_g058124	AtWRKY20, WRKY20	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g058352	WRKY3	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g15071	ATWRKY58, WRKY58	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.12G025600.1	AtWRKY20,...	WRKY-type transcription factor & original description:...	0.02	OrthoFinder output from all 47 species
Dac_g12166	AtWRKY20, WRKY20	WRKY-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Ehy_g26902	WRKY31, ATWRKY31	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01035965001	WRKY32, ATWRKY32	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
LOC_Os07g39480.1	AtWRKY20,...	transcription factor (WRKY)	0.06	OrthoFinder output from all 47 species
Len_g50898	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g05639	WRKY4	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g08941	AtWRKY20, WRKY20	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Nbi_g05882	WRKY4	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g09401	WRKY43, ATWRKY43	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g24026	AtWRKY20, WRKY20	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g17624	WRKY3	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g00878	WRKY56, ATWRKY56	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g22422	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g26807	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e038062_P002	WRKY4, Zm00001e038062	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000155	phosphorelay sensor kinase activity	IEP	HCCA
MF	GO:0003924	GTPase activity	IEP	HCCA
MF	GO:0004673	protein histidine kinase activity	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
BP	GO:0007165	signal transduction	IEP	HCCA
BP	GO:0007186	G protein-coupled receptor signaling pathway	IEP	HCCA
MF	GO:0016775	phosphotransferase activity, nitrogenous group as acceptor	IEP	HCCA
MF	GO:0019001	guanyl nucleotide binding	IEP	HCCA
MF	GO:0031683	G-protein beta/gamma-subunit complex binding	IEP	HCCA
MF	GO:0044877	protein-containing complex binding	IEP	HCCA
MF	GO:0140299	small molecule sensor activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	418	474
IPR003657	WRKY_dom	251	306

External Links

No external refs found!

Zm00001e022143_P002 (WRKY4, Zm00001e022143)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation