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  5. Zm00001e021659_P001

Zm00001e021659_P001 (SDG2, ATXR3, Zm00001e021659)


Aliases : SDG2, ATXR3, Zm00001e021659

Description : class III/Trithorax histone methyltransferase component of histone lysine methylation/demethylation


Gene families : OG0002791 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002791_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e021659_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00043p00149000 SDG2, ATXR3,... Chromatin organisation.histone modifications.histone... 0.08 OrthoFinder output from all 47 species
AT4G15180 SDG2, ATXR3 SET domain protein 2 0.06 OrthoFinder output from all 47 species
Adi_g039581 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g116452 SDG2, ATXR3 class-III histone methyltransferase *(Trx) & original... 0.07 OrthoFinder output from all 47 species
Aev_g14143 SDG2, ATXR3 class-III histone methyltransferase *(Trx) & original... 0.07 OrthoFinder output from all 47 species
Ala_g13000 SDG2, ATXR3 class-III histone methyltransferase *(Trx) & original... 0.15 OrthoFinder output from all 47 species
Als_g21633 SDG2, ATXR3 class-III histone methyltransferase *(Trx) & original... 0.06 OrthoFinder output from all 47 species
Aob_g28999 SDG2, ATXR3 class-III histone methyltransferase *(Trx) & original... 0.12 OrthoFinder output from all 47 species
Aop_g29882 SDG2, ATXR3 class-III histone methyltransferase *(Trx) & original... 0.07 OrthoFinder output from all 47 species
Aspi01Gene24078.t2 SDG2, ATXR3,... class-III histone methyltransferase *(Trx) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0043.g027108 SDG2, ATXR3 class-III histone methyltransferase *(Trx) & original... 0.05 OrthoFinder output from all 47 species
Azfi_s0296.g063535 SDG2, ATXR3 class-III histone methyltransferase *(Trx) & original... 0.03 OrthoFinder output from all 47 species
Cba_g33105 SDG2, ATXR3 class-III histone methyltransferase *(Trx) & original... 0.05 OrthoFinder output from all 47 species
Ceric.18G017200.1 SDG2, ATXR3,... class-III histone methyltransferase *(Trx) & original... 0.18 OrthoFinder output from all 47 species
Cre17.g742700 SDG2, ATXR3 Chromatin organisation.histone modifications.histone... 0.01 OrthoFinder output from all 47 species
Dac_g23370 SDG2, ATXR3 class-III histone methyltransferase *(Trx) & original... 0.04 OrthoFinder output from all 47 species
Dcu_g07181 SDG2, ATXR3 class-III histone methyltransferase *(Trx) & original... 0.12 OrthoFinder output from all 47 species
Ehy_g05119 SDG2, ATXR3 class-III histone methyltransferase *(Trx) & original... 0.07 OrthoFinder output from all 47 species
GSVIVT01030649001 SDG2, ATXR3 Chromatin organisation.histone modifications.histone... 0.15 OrthoFinder output from all 47 species
LOC_Os08g08210.1 SDG2, ATXR3,... class III/Trithorax histone methyltransferase component... 0.18 OrthoFinder output from all 47 species
Len_g14756 SDG2, ATXR3 class-III histone methyltransferase *(Trx) & original... 0.04 OrthoFinder output from all 47 species
Lfl_g02478 SDG2, ATXR3 class-III histone methyltransferase *(Trx) & original... 0.13 OrthoFinder output from all 47 species
MA_102811g0010 SDG2, ATXR3 class III/Trithorax histone methyltransferase component... 0.13 OrthoFinder output from all 47 species
MA_102811g0020 SDG2, ATXR3 class III/Trithorax histone methyltransferase component... 0.04 OrthoFinder output from all 47 species
Mp2g06500.1 SDG2, ATXR3 class III/Trithorax histone methyltransferase component... 0.11 OrthoFinder output from all 47 species
Msp_g15475 SDG2, ATXR3 class-III histone methyltransferase *(Trx) & original... 0.12 OrthoFinder output from all 47 species
Nbi_g03226 SDG2, ATXR3 class-III histone methyltransferase *(Trx) & original... 0.06 OrthoFinder output from all 47 species
Ore_g37217 SDG2, ATXR3 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g37849 SDG2, ATXR3 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g41517 SDG2, ATXR3 class-III histone methyltransferase *(Trx) & original... 0.09 OrthoFinder output from all 47 species
Pir_g65975 SDG2, ATXR3 class-III histone methyltransferase *(Trx) & original... 0.04 OrthoFinder output from all 47 species
Ppi_g02428 SDG2, ATXR3 class-III histone methyltransferase *(Trx) & original... 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0023.g008756 SDG2, ATXR3 class-III histone methyltransferase *(Trx) & original... 0.1 OrthoFinder output from all 47 species
Sam_g17455 No alias class-III histone methyltransferase *(Trx) & original... 0.13 OrthoFinder output from all 47 species
Sam_g41986 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Smo432361 SDG2, ATXR3 Chromatin organisation.histone modifications.histone... 0.06 OrthoFinder output from all 47 species
Smo447947 SDG2, ATXR3 Chromatin organisation.histone modifications.histone... 0.08 OrthoFinder output from all 47 species
Solyc07g052940.4.1 SDG2, ATXR3,... class III/Trithorax histone methyltransferase component... 0.19 OrthoFinder output from all 47 species
Spa_g50988 SDG2, ATXR3 class-III histone methyltransferase *(Trx) & original... 0.08 OrthoFinder output from all 47 species
Tin_g09792 SDG2, ATXR3 class-III histone methyltransferase *(Trx) & original... 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0004402 histone acetyltransferase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
BP GO:0006473 protein acetylation IEP HCCA
BP GO:0006475 internal protein amino acid acetylation IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016573 histone acetylation IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0018393 internal peptidyl-lysine acetylation IEP HCCA
BP GO:0018394 peptidyl-lysine acetylation IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0034212 peptide N-acetyltransferase activity IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042393 histone binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001214 SET_dom 1769 1836
No external refs found!