Aliases : PGR7, Zm00001e021560
Description : regulatory glutamyl-tRNA reductase-binding protein
Gene families : OG0005479 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005479_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Zm00001e021560_P005 | |
Cluster | HCCA: Cluster_114 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT3G21200 | PGR7 | proton gradient regulation 7 | 0.01 | OrthoFinder output from all 47 species | |
Adi_g041120 | No alias | regulatory protein *(GluTRBP) of glutamyl-tRNA reductase... | 0.02 | OrthoFinder output from all 47 species | |
Als_g12286 | No alias | regulatory protein *(GluTRBP) of glutamyl-tRNA reductase... | 0.02 | OrthoFinder output from all 47 species | |
Aop_g19943 | PGR7 | regulatory protein *(GluTRBP) of glutamyl-tRNA reductase... | 0.02 | OrthoFinder output from all 47 species | |
Ceric.15G026600.1 | PGR7, Ceric.15G026600 | regulatory protein *(GluTRBP) of glutamyl-tRNA reductase... | 0.04 | OrthoFinder output from all 47 species | |
Cre03.g156600 | No alias | Glutamyl-tRNA reductase-binding protein, chloroplastic... | 0.08 | OrthoFinder output from all 47 species | |
Dcu_g03694 | PGR7 | regulatory protein *(GluTRBP) of glutamyl-tRNA reductase... | 0.03 | OrthoFinder output from all 47 species | |
Dde_g08598 | PGR7 | regulatory protein *(GluTRBP) of glutamyl-tRNA reductase... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01016137001 | PGR7 | Glutamyl-tRNA reductase-binding protein, chloroplastic... | 0.14 | OrthoFinder output from all 47 species | |
LOC_Os08g15500.1 | PGR7, LOC_Os08g15500 | regulatory glutamyl-tRNA reductase-binding protein | 0.23 | OrthoFinder output from all 47 species | |
Len_g08515 | PGR7 | regulatory protein *(GluTRBP) of glutamyl-tRNA reductase... | 0.05 | OrthoFinder output from all 47 species | |
Mp1g03280.1 | No alias | regulatory glutamyl-tRNA reductase-binding protein | 0.06 | OrthoFinder output from all 47 species | |
Msp_g27266 | PGR7 | regulatory protein *(GluTRBP) of glutamyl-tRNA reductase... | 0.02 | OrthoFinder output from all 47 species | |
Ore_g03810 | PGR7 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ore_g18836 | PGR7 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ore_g41228 | No alias | regulatory protein *(GluTRBP) of glutamyl-tRNA reductase... | 0.05 | OrthoFinder output from all 47 species | |
Ppi_g01872 | PGR7 | regulatory protein *(GluTRBP) of glutamyl-tRNA reductase... | 0.06 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0010.g004956 | No alias | regulatory protein *(GluTRBP) of glutamyl-tRNA reductase... | 0.06 | OrthoFinder output from all 47 species | |
Sam_g09979 | No alias | regulatory protein *(GluTRBP) of glutamyl-tRNA reductase... | 0.03 | OrthoFinder output from all 47 species | |
Solyc03g123880.3.1 | PGR7, Solyc03g123880 | regulatory glutamyl-tRNA reductase-binding protein | 0.1 | OrthoFinder output from all 47 species | |
Spa_g04454 | PGR7 | regulatory protein *(GluTRBP) of glutamyl-tRNA reductase... | 0.11 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | HCCA |
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003746 | translation elongation factor activity | IEP | HCCA |
MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
CC | GO:0005840 | ribosome | IEP | HCCA |
BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
BP | GO:0006414 | translational elongation | IEP | HCCA |
BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
MF | GO:0016782 | transferase activity, transferring sulphur-containing groups | IEP | HCCA |
MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
BP | GO:0018208 | peptidyl-proline modification | IEP | HCCA |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
MF | GO:0035596 | methylthiotransferase activity | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
BP | GO:0043038 | amino acid activation | IEP | HCCA |
BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
CC | GO:0043226 | organelle | IEP | HCCA |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
CC | GO:0043229 | intracellular organelle | IEP | HCCA |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
MF | GO:0045182 | translation regulator activity | IEP | HCCA |
MF | GO:0050497 | alkylthioltransferase activity | IEP | HCCA |
MF | GO:0051536 | iron-sulfur cluster binding | IEP | HCCA |
MF | GO:0051539 | 4 iron, 4 sulfur cluster binding | IEP | HCCA |
MF | GO:0051540 | metal cluster binding | IEP | HCCA |
MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR019595 | DUF2470 | 211 | 283 |
No external refs found! |