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  5. Zm00001e011796_P001

Zm00001e011796_P001 (V157, PDE166, ALB1,...)


Aliases : V157, PDE166, ALB1, CHLD, ALB-1V, Zm00001e011796

Description : component CHL-D of magnesium-chelatase complex


Gene families : OG0005530 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005530_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e011796_P001
Cluster HCCA: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00053p00151810 V157, PDE166,... Enzyme classification.EC_6 ligases.EC_6.6 ligase forming... 0.1 OrthoFinder output from all 47 species
AMTR_s00053p00152680 V157, PDE166,... Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.09 OrthoFinder output from all 47 species
AT1G08520 V157, PDE166,... ALBINA 1 0.19 OrthoFinder output from all 47 species
Adi_g106636 V157, PDE166,... EC_6.6 ligase forming nitrogen-metal bond & original... 0.04 OrthoFinder output from all 47 species
Aev_g43655 V157, PDE166,... EC_6.6 ligase forming nitrogen-metal bond & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0049.g030898 V157, PDE166,... EC_6.6 ligase forming nitrogen-metal bond & original... 0.05 OrthoFinder output from all 47 species
Cba_g04049 V157, PDE166,... EC_6.6 ligase forming nitrogen-metal bond & original... 0.03 OrthoFinder output from all 47 species
Ceric.13G055900.1 V157, PDE166,... EC_6.6 ligase forming nitrogen-metal bond & original... 0.11 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001537.12 V157, PDE166,... Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.04 OrthoFinder output from all 47 species
Cre05.g242000 V157, PDE166,... Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.06 OrthoFinder output from all 47 species
Dde_g22875 V157, PDE166,... EC_6.6 ligase forming nitrogen-metal bond & original... 0.02 OrthoFinder output from all 47 species
Ehy_g11037 V157, PDE166,... EC_6.6 ligase forming nitrogen-metal bond & original... 0.05 OrthoFinder output from all 47 species
GSVIVT01002904001 V157, PDE166,... Magnesium-chelatase subunit ChlD, chloroplastic OS=Oryza... 0.06 OrthoFinder output from all 47 species
Gb_04254 V157, PDE166,... component CHL-D of magnesium-chelatase complex 0.11 OrthoFinder output from all 47 species
LOC_Os03g59640.1 V157, PDE166,... component CHL-D of magnesium-chelatase complex 0.25 OrthoFinder output from all 47 species
Len_g12127 V157, PDE166,... EC_6.6 ligase forming nitrogen-metal bond & original... 0.07 OrthoFinder output from all 47 species
Lfl_g04202 V157, PDE166,... EC_6.6 ligase forming nitrogen-metal bond & original... 0.06 OrthoFinder output from all 47 species
MA_10428524g0010 V157, PDE166,... Magnesium-chelatase subunit ChlD, chloroplastic OS=Pisum... 0.03 OrthoFinder output from all 47 species
MA_159069g0010 V157, PDE166,... Magnesium-chelatase subunit ChlD, chloroplastic... 0.02 OrthoFinder output from all 47 species
MA_173818g0010 V157, PDE166,... Magnesium-chelatase subunit ChlD, chloroplastic... 0.05 OrthoFinder output from all 47 species
Mp6g04260.1 V157, PDE166,... component CHL-D of magnesium-chelatase complex 0.1 OrthoFinder output from all 47 species
Msp_g10513 V157, PDE166,... EC_6.6 ligase forming nitrogen-metal bond & original... 0.03 OrthoFinder output from all 47 species
Nbi_g13327 V157, PDE166,... EC_6.6 ligase forming nitrogen-metal bond & original... 0.03 OrthoFinder output from all 47 species
Ore_g05358 V157, PDE166,... EC_6.6 ligase forming nitrogen-metal bond & original... 0.09 OrthoFinder output from all 47 species
Pnu_g08517 V157, PDE166,... EC_6.6 ligase forming nitrogen-metal bond & original... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007960 V157, PDE166,... EC_6.6 ligase forming nitrogen-metal bond & original... 0.03 OrthoFinder output from all 47 species
Sam_g18049 No alias EC_6.6 ligase forming nitrogen-metal bond & original... 0.03 OrthoFinder output from all 47 species
Smo174616 V157, PDE166,... Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.06 OrthoFinder output from all 47 species
Solyc04g015490.4.1 V157, PDE166,... component CHL-D of magnesium-chelatase complex 0.14 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0002161 aminoacyl-tRNA editing activity IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008312 7S RNA binding IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
MF GO:0032977 membrane insertase activity IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
CC GO:0048500 signal recognition particle IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140597 protein carrier chaperone IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR041628 ChlI/MoxR_AAA_lid 343 407
IPR000523 Mg_chelatse_chII-like_cat_dom 197 265
IPR002035 VWF_A 553 658
No external refs found!