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  5. Zm00001e008908_P001

Zm00001e008908_P001 (ATUBP5, UBP5, PDE323,...)


Aliases : ATUBP5, UBP5, PDE323, Zm00001e008908

Description : deubiquitinase (UBP5|8-11)


Gene families : OG0001745 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001745_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e008908_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00020p00234520 ATUBP5, UBP5,... Protein degradation.peptidase families.cysteine-type... 0.03 OrthoFinder output from all 47 species
AT2G40930 ATUBP5, UBP5, PDE323 ubiquitin-specific protease 5 0.02 OrthoFinder output from all 47 species
AT4G10590 UBP10 ubiquitin-specific protease 10 0.03 OrthoFinder output from all 47 species
AT5G22030 UBP8 ubiquitin-specific protease 8 0.02 OrthoFinder output from all 47 species
Aev_g07324 ATUBP5, UBP5, PDE323 deubiquitinase *(UBP5/8-11) & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g26453 ATUBP5, UBP5, PDE323 deubiquitinase *(UBP5/8-11) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g07429 ATUBP5, UBP5, PDE323 deubiquitinase *(UBP5/8-11) & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g00801 UBP10 deubiquitinase *(UBP5/8-11) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g06968 ATUBP5, UBP5, PDE323 deubiquitinase *(UBP5/8-11) & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.33G024300.1 ATUBP5, UBP5,... deubiquitinase *(UBP5/8-11) & original description:... 0.03 OrthoFinder output from all 47 species
Dde_g02984 ATUBP5, UBP5, PDE323 deubiquitinase *(UBP5/8-11) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g15805 ATUBP5, UBP5, PDE323 deubiquitinase *(UBP5/8-11) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01001899001 ATUBP5, UBP5, PDE323 Protein degradation.peptidase families.cysteine-type... 0.05 OrthoFinder output from all 47 species
GSVIVT01019677001 UBP10 Protein degradation.peptidase families.cysteine-type... 0.07 OrthoFinder output from all 47 species
GSVIVT01022582001 UBP8 Protein degradation.peptidase families.cysteine-type... 0.05 OrthoFinder output from all 47 species
Gb_06866 ATUBP5, UBP5, PDE323 deubiquitinase (UBP5|8-11) 0.03 OrthoFinder output from all 47 species
Gb_11501 ATUBP5, UBP5, PDE323 deubiquitinase (UBP5|8-11) 0.03 OrthoFinder output from all 47 species
LOC_Os10g07270.1 UBP9, LOC_Os10g07270 deubiquitinase (UBP5|8-11) 0.03 OrthoFinder output from all 47 species
LOC_Os11g28360.1 ATUBP5, UBP5,... Ubiquitin carboxyl-terminal hydrolase 5 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
LOC_Os11g28365.1 ATUBP5, UBP5,... deubiquitinase (UBP5|8-11) 0.1 OrthoFinder output from all 47 species
Len_g08177 ATUBP5, UBP5, PDE323 deubiquitinase *(UBP5/8-11) & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g02368 ATUBP5, UBP5, PDE323 deubiquitinase *(UBP5/8-11) & original description: none 0.06 OrthoFinder output from all 47 species
MA_10425850g0010 ATUBP5, UBP5, PDE323 Ubiquitin carboxyl-terminal hydrolase 5 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_11753g0010 UBP9 deubiquitinase (UBP5|8-11) 0.09 OrthoFinder output from all 47 species
Mp3g14190.1 ATUBP5, UBP5, PDE323 deubiquitinase (UBP5|8-11) 0.02 OrthoFinder output from all 47 species
Msp_g00705 ATUBP5, UBP5, PDE323 deubiquitinase *(UBP5/8-11) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g10435 UBP10 deubiquitinase *(UBP5/8-11) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g01688 UBP10 deubiquitinase *(UBP5/8-11) & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g19443 No alias deubiquitinase *(UBP5/8-11) & original description: none 0.06 OrthoFinder output from all 47 species
Smo61965 UBP9 Protein degradation.peptidase families.cysteine-type... 0.03 OrthoFinder output from all 47 species
Solyc08g083300.4.1 UBP9, Solyc08g083300 deubiquitinase (UBP5|8-11) 0.12 OrthoFinder output from all 47 species
Solyc09g019970.3.1 ATUBP5, UBP5,... deubiquitinase (UBP5|8-11) 0.05 OrthoFinder output from all 47 species
Spa_g05739 ATUBP5, UBP5, PDE323 deubiquitinase *(UBP5/8-11) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e002683_P002 UBP9, Zm00001e002683 deubiquitinase (UBP5|8-11) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004843 cysteine-type deubiquitinase activity IEA Interproscan
BP GO:0016579 protein deubiquitination IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0004197 cysteine-type endopeptidase activity IEP HCCA
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0010921 regulation of phosphatase activity IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
BP GO:0019220 regulation of phosphate metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0019902 phosphatase binding IEP HCCA
MF GO:0019903 protein phosphatase binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031399 regulation of protein modification process IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0035303 regulation of dephosphorylation IEP HCCA
BP GO:0035304 regulation of protein dephosphorylation IEP HCCA
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051174 regulation of phosphorus metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051336 regulation of hydrolase activity IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR029346 USP_C 480 621
IPR006615 Pept_C19_DUSP 33 136
IPR001394 Peptidase_C19_UCH 306 878
No external refs found!