1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001e006373_P001

Zm00001e006373_P001 (Zm00001e006373)


Aliases : Zm00001e006373

Description : EF-Tu translation elongation factor


Gene families : OG0001305 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001305_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e006373_P001
Cluster HCCA: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00115820 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.05 OrthoFinder output from all 47 species
AT4G02930 No alias GTP binding Elongation factor Tu family protein 0.18 OrthoFinder output from all 47 species
Adi_g112717 No alias translation elongation factor *(EF-Tu) & original... 0.02 OrthoFinder output from all 47 species
Aop_g11193 No alias translation elongation factor *(EF-Tu) & original... 0.06 OrthoFinder output from all 47 species
Cba_g07152 No alias translation elongation factor *(EF-Tu) & original... 0.03 OrthoFinder output from all 47 species
Ceric.33G051100.1 Ceric.33G051100 translation elongation factor *(EF-Tu) & original... 0.11 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021127.40 No alias Protein biosynthesis.organelle translation... 0.01 OrthoFinder output from all 47 species
Cre06.g259150 No alias Protein biosynthesis.organelle translation... 0.04 OrthoFinder output from all 47 species
Dac_g36457 No alias translation elongation factor *(EF-Tu) & original... 0.02 OrthoFinder output from all 47 species
Dcu_g01379 No alias translation elongation factor *(EF-Tu) & original... 0.06 OrthoFinder output from all 47 species
Dde_g10692 No alias translation elongation factor *(EF-Tu) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g15550 No alias translation elongation factor *(EF-Tu) & original... 0.05 OrthoFinder output from all 47 species
GSVIVT01011073001 No alias Protein biosynthesis.organelle translation... 0.1 OrthoFinder output from all 47 species
LOC_Os03g63410.1 LOC_Os03g63410 EF-Tu translation elongation factor 0.29 OrthoFinder output from all 47 species
Len_g01241 No alias translation elongation factor *(EF-Tu) & original... 0.04 OrthoFinder output from all 47 species
Lfl_g01476 No alias translation elongation factor *(EF-Tu) & original... 0.03 OrthoFinder output from all 47 species
MA_198162g0010 No alias EF-Tu translation elongation factor 0.02 OrthoFinder output from all 47 species
MA_58335g0010 No alias EF-Tu translation elongation factor 0.1 OrthoFinder output from all 47 species
Mp1g14750.1 No alias EF-Tu translation elongation factor 0.06 OrthoFinder output from all 47 species
Nbi_g01170 No alias translation elongation factor *(EF-Tu) & original... 0.04 OrthoFinder output from all 47 species
Ore_g05800 No alias translation elongation factor *(EF-Tu) & original... 0.02 OrthoFinder output from all 47 species
Pnu_g07174 No alias translation elongation factor *(EF-Tu) & original... 0.05 OrthoFinder output from all 47 species
Sam_g09872 No alias translation elongation factor *(EF-Tu) & original... 0.03 OrthoFinder output from all 47 species
Sam_g24887 No alias translation elongation factor *(EF-Tu) & original... 0.04 OrthoFinder output from all 47 species
Smo153081 No alias Protein biosynthesis.organelle translation... 0.07 OrthoFinder output from all 47 species
Solyc06g008940.4.1 Solyc06g008940 EF-Tu translation elongation factor 0.08 OrthoFinder output from all 47 species
Solyc09g073000.3.1 Solyc09g073000 EF-Tu translation elongation factor 0.08 OrthoFinder output from all 47 species
Spa_g01140 No alias translation elongation factor *(EF-Tu) & original... 0.04 OrthoFinder output from all 47 species
Tin_g06040 No alias translation elongation factor *(EF-Tu) & original... 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005759 mitochondrial matrix IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0032977 membrane insertase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140597 protein carrier chaperone IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004160 Transl_elong_EFTu/EF1A_C 357 450
IPR000795 T_Tr_GTP-bd_dom 64 257
IPR004161 EFTu-like_2 281 352
No external refs found!