Zm00001e006252_P001 (SPL1, Zm00001e006252)


Aliases : SPL1, Zm00001e006252

Description : transcription factor (SBP)


Gene families : OG0001309 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001309_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e006252_P001
Cluster HCCA: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
AT1G20980 SPL1R2, ATSPL14,... squamosa promoter binding protein-like 14 0.03 OrthoFinder output from all 47 species
Adi_g125517 SPL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07275 SPL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g29191 SPL1R2, ATSPL14,... SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g31923 SPL1R2, ATSPL14,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34071.t1 SPL1R2, ATSPL14,... SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g31507 SPL12 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.01G021200.1 Ceric.01G021200 SBP-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.10G052200.1 SPL12, Ceric.10G052200 SBP-type transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
Ehy_g05078 SPL1 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01013452001 SPL1R2, ATSPL14,... RNA biosynthesis.transcriptional activation.SBP... 0.06 OrthoFinder output from all 47 species
GSVIVT01028208001 SPL1 RNA biosynthesis.transcriptional activation.SBP... 0.04 OrthoFinder output from all 47 species
Gb_00228 SPL1 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
LOC_Os03g61760.1 SPL1, LOC_Os03g61760 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
LOC_Os08g40260.1 LOC_Os08g40260 transcription factor (SBP) 0.06 OrthoFinder output from all 47 species
Lfl_g02394 SPL1 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_10427464g0010 No alias transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Mp1g13640.1 No alias transcription factor (SBP) 0.06 OrthoFinder output from all 47 species
Nbi_g02473 SPL1R2, ATSPL14,... SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Smo437670 SPL1 RNA biosynthesis.transcriptional activation.SBP... 0.02 OrthoFinder output from all 47 species
Solyc01g068100.4.1 SPL1, Solyc01g068100 Squamosa promoter-binding-like protein 1 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Solyc05g053240.4.1 SPL1, Solyc05g053240 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Spa_g26324 SPL1 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g12976 No alias SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0042025 host cell nucleus IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
CC GO:0000439 transcription factor TFIIH core complex IEP HCCA
MF GO:0001671 ATPase activator activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005244 voltage-gated monoatomic ion channel activity IEP HCCA
MF GO:0005247 voltage-gated chloride channel activity IEP HCCA
MF GO:0005253 monoatomic anion channel activity IEP HCCA
MF GO:0005254 chloride channel activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006289 nucleotide-excision repair IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
BP GO:0006821 chloride transport IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
CC GO:0008287 protein serine/threonine phosphatase complex IEP HCCA
MF GO:0008308 voltage-gated monoatomic anion channel activity IEP HCCA
MF GO:0008509 monoatomic anion transmembrane transporter activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015108 chloride transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019208 phosphatase regulator activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0019888 protein phosphatase regulator activity IEP HCCA
MF GO:0022832 voltage-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
CC GO:1903293 phosphatase complex IEP HCCA
InterPro domains Description Start Stop
IPR004333 SBP_dom 155 228
No external refs found!