Zm00001e003858_P001 (Zm00001e003858)

Aliases : Zm00001e003858

Description : transcription factor (DREB)

Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e003858_P001
Cluster	HCCA: Cluster_76

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00025p00249140	evm_27.TU.AmTr_v1...	Cell wall.cutin and suberin.biosynthesis...	0.02	OrthoFinder output from all 47 species
AMTR_s00039p00088760	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	OrthoFinder output from all 47 species
AT1G04370	ERF14, ATERF14	Ethylene-responsive element binding factor 14	0.03	OrthoFinder output from all 47 species
AT1G06160	ORA59	octadecanoid-responsive Arabidopsis AP2/ERF 59	0.05	OrthoFinder output from all 47 species
AT1G75490	No alias	Integrase-type DNA-binding superfamily protein	0.06	OrthoFinder output from all 47 species
AT2G40220	ABI4, SAN5,...	Integrase-type DNA-binding superfamily protein	0.02	OrthoFinder output from all 47 species
AT3G23230	No alias	Integrase-type DNA-binding superfamily protein	0.03	OrthoFinder output from all 47 species
AT4G11140	CRF1	cytokinin response factor 1	0.04	OrthoFinder output from all 47 species
Aop_g03440	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Aop_g18832	ERF7, ATERF7, ATERF-7	subgroup ERF-VIII transcription factor & original...	0.03	OrthoFinder output from all 47 species
Azfi_s0234.g059449	No alias	subgroup ERF-III transcription factor & original...	0.02	OrthoFinder output from all 47 species
Cba_g10614	ATERF12, ERF12	subgroup ERF-VIII transcription factor & original...	0.02	OrthoFinder output from all 47 species
Ceric.13G085100.1	Ceric.13G085100	not classified & original description: pacid=50636474...	0.02	OrthoFinder output from all 47 species
Cre08.g364400	RAP2.2	No description available	0.02	OrthoFinder output from all 47 species
Dac_g14308	No alias	subgroup ERF-I transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g17593	CRF3	subgroup ERF-VI transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01009801001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	OrthoFinder output from all 47 species
GSVIVT01010630001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	OrthoFinder output from all 47 species
GSVIVT01022277001	ABR1	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	OrthoFinder output from all 47 species
GSVIVT01026334001	No alias	Ethylene-responsive transcription factor ERF003...	0.02	OrthoFinder output from all 47 species
GSVIVT01033795001	DREB1B, ATCBF1, CBF1	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	OrthoFinder output from all 47 species
Gb_03783	ERF-1, ATERF-1	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
Gb_09495	RAP2.11	transcription factor (ERF). transcription factor (ERN1)	0.02	OrthoFinder output from all 47 species
Gb_11856	HRE2	Ethylene-responsive transcription factor RAP2-3...	0.02	OrthoFinder output from all 47 species
Gb_23321	ERF-1, ATERF-1	transcription factor (ERF)	0.03	OrthoFinder output from all 47 species
Gb_41836	ERF-1, ATERF-1	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
LOC_Os02g10760.1	WIN1, SHN1,...	transcription factor (ERF). SHN-type cutin and suberin...	0.02	OrthoFinder output from all 47 species
LOC_Os02g43820.1	ERF5, ATERF-5,...	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
LOC_Os04g56150.1	LOC_Os04g56150	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
LOC_Os06g07030.1	RAP2.9, DEAR5,...	transcription factor (DREB)	0.05	OrthoFinder output from all 47 species
LOC_Os08g35240.1	LOC_Os08g35240	Ethylene-responsive transcription factor ERF017...	0.02	OrthoFinder output from all 47 species
LOC_Os08g45110.1	LOC_Os08g45110	transcription factor (DREB)	0.05	OrthoFinder output from all 47 species
LOC_Os12g41060.1	LOC_Os12g41060	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Len_g13204	No alias	subgroup ERF-V transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g13705	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g30898	RAP2.12	transcription factor component *(HRE/RAP2.12) of...	0.02	OrthoFinder output from all 47 species
Lfl_g31233	RAP2.12	transcription factor component *(HRE/RAP2.12) of...	0.03	OrthoFinder output from all 47 species
MA_10031781g0010	ERF-1, ATERF-1	transcription factor (ERF)	0.03	OrthoFinder output from all 47 species
MA_162045g0010	DREB26	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species
MA_938274g0010	ERF-1, ATERF-1	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
Mp5g02590.1	No alias	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species
Nbi_g26195	RAP2.2	transcription factor component *(HRE/RAP2.12) of...	0.02	OrthoFinder output from all 47 species
Ore_g30771	RAP2.11	transcription factor *(ERN1) & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g32583	ATERF3, ERF3	subgroup ERF-VIII transcription factor & original...	0.02	OrthoFinder output from all 47 species
Ore_g38776	ERF-1, ATERF-1	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g01623	No alias	subgroup ERF-III transcription factor & original...	0.02	OrthoFinder output from all 47 species
Pnu_g17102	ERF2, ATERF2, ATERF-2	subgroup ERF-IX transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Pnu_g25395	DREB2A, DREB2	subgroup ERF-IV/DREB2 transcription factor & original...	0.02	OrthoFinder output from all 47 species
Pnu_g34102	ORA47	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g00355	DEAR3	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0040.g012398	DEAR1, CEJ1, ATERF#011	not classified & original description: CDS=1-1134	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0066.g016160	ERF-1, ATERF-1	subgroup ERF-IX transcription factor & original...	0.02	OrthoFinder output from all 47 species
Solyc02g090790.1.1	RRTF1, Solyc02g090790	transcription factor (ERF)	0.04	OrthoFinder output from all 47 species
Solyc03g006320.1.1	ATERF4, RAP2.5,...	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
Solyc03g095977.1.1	ABI4, SAN5,...	transcription factor (DREB)	0.03	OrthoFinder output from all 47 species
Solyc04g050750.2.1	Solyc04g050750	transcription factor (DREB)	0.06	OrthoFinder output from all 47 species
Solyc04g051360.3.1	ABR1, Solyc04g051360	transcription factor (ERF)	0.03	OrthoFinder output from all 47 species
Solyc05g051200.1.1	ERF1, ATERF1,...	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
Solyc08g078410.2.1	Solyc08g078410	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species
Zm00001e023759_P001	Zm00001e023759	Ethylene-responsive transcription factor ERF017...	0.03	OrthoFinder output from all 47 species
Zm00001e031497_P001	ABI4, SAN5,...	Ethylene-responsive transcription factor ABI4 OS=Oryza...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	HCCA
MF	GO:0004066	asparagine synthase (glutamine-hydrolyzing) activity	IEP	HCCA
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	HCCA
MF	GO:0004568	chitinase activity	IEP	HCCA
BP	GO:0006022	aminoglycan metabolic process	IEP	HCCA
BP	GO:0006026	aminoglycan catabolic process	IEP	HCCA
BP	GO:0006030	chitin metabolic process	IEP	HCCA
BP	GO:0006032	chitin catabolic process	IEP	HCCA
BP	GO:0006040	amino sugar metabolic process	IEP	HCCA
BP	GO:0006520	amino acid metabolic process	IEP	HCCA
BP	GO:0006528	asparagine metabolic process	IEP	HCCA
BP	GO:0006529	asparagine biosynthetic process	IEP	HCCA
MF	GO:0008061	chitin binding	IEP	HCCA
BP	GO:0008652	amino acid biosynthetic process	IEP	HCCA
BP	GO:0009056	catabolic process	IEP	HCCA
BP	GO:0009057	macromolecule catabolic process	IEP	HCCA
BP	GO:0009066	aspartate family amino acid metabolic process	IEP	HCCA
BP	GO:0009067	aspartate family amino acid biosynthetic process	IEP	HCCA
BP	GO:0016053	organic acid biosynthetic process	IEP	HCCA
MF	GO:0016787	hydrolase activity	IEP	HCCA
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	HCCA
MF	GO:0016874	ligase activity	IEP	HCCA
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	IEP	HCCA
MF	GO:0016884	carbon-nitrogen ligase activity, with glutamine as amido-N-donor	IEP	HCCA
BP	GO:0016998	cell wall macromolecule catabolic process	IEP	HCCA
BP	GO:0030001	metal ion transport	IEP	HCCA
BP	GO:0044036	cell wall macromolecule metabolic process	IEP	HCCA
BP	GO:0044248	cellular catabolic process	IEP	HCCA
BP	GO:0044260	cellular macromolecule metabolic process	IEP	HCCA
BP	GO:0044265	cellular macromolecule catabolic process	IEP	HCCA
BP	GO:0044283	small molecule biosynthetic process	IEP	HCCA
BP	GO:0046348	amino sugar catabolic process	IEP	HCCA
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	HCCA
BP	GO:1901071	glucosamine-containing compound metabolic process	IEP	HCCA
BP	GO:1901072	glucosamine-containing compound catabolic process	IEP	HCCA
BP	GO:1901135	carbohydrate derivative metabolic process	IEP	HCCA
BP	GO:1901136	carbohydrate derivative catabolic process	IEP	HCCA
BP	GO:1901564	organonitrogen compound metabolic process	IEP	HCCA
BP	GO:1901565	organonitrogen compound catabolic process	IEP	HCCA
BP	GO:1901575	organic substance catabolic process	IEP	HCCA
BP	GO:1901605	alpha-amino acid metabolic process	IEP	HCCA
BP	GO:1901607	alpha-amino acid biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	132	180

External Links

No external refs found!

Zm00001e003858_P001 (Zm00001e003858)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation