Zm00001e002683_P002 (UBP9, Zm00001e002683)

Aliases : UBP9, Zm00001e002683

Description : deubiquitinase (UBP5|8-11)

Gene families : OG0001745 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001745_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e002683_P002

Target	Alias	Description	ECC score	Gene Family Method
AT4G10590	UBP10	ubiquitin-specific protease 10	0.03	OrthoFinder output from all 47 species
Adi_g114833	UBP10	deubiquitinase *(UBP5/8-11) & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g07324	ATUBP5, UBP5, PDE323	deubiquitinase *(UBP5/8-11) & original description: none	0.04	OrthoFinder output from all 47 species
Aob_g07429	ATUBP5, UBP5, PDE323	deubiquitinase *(UBP5/8-11) & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g00801	UBP10	deubiquitinase *(UBP5/8-11) & original description: none	0.04	OrthoFinder output from all 47 species
Azfi_s0039.g026427	ATUBP5, UBP5, PDE323	deubiquitinase *(UBP5/8-11) & original description: CDS=459-2849	0.03	OrthoFinder output from all 47 species
GSVIVT01019677001	UBP10	Protein degradation.peptidase families.cysteine-type...	0.04	OrthoFinder output from all 47 species
LOC_Os11g28360.1	ATUBP5, UBP5,...	Ubiquitin carboxyl-terminal hydrolase 5 OS=Arabidopsis...	0.05	OrthoFinder output from all 47 species
Lfl_g02368	ATUBP5, UBP5, PDE323	deubiquitinase *(UBP5/8-11) & original description: none	0.04	OrthoFinder output from all 47 species
MA_10436012g0010	ATUBP5, UBP5, PDE323	deubiquitinase (UBP5\|8-11)	0.03	OrthoFinder output from all 47 species
MA_11753g0010	UBP9	deubiquitinase (UBP5\|8-11)	0.04	OrthoFinder output from all 47 species
Mp3g14190.1	ATUBP5, UBP5, PDE323	deubiquitinase (UBP5\|8-11)	0.02	OrthoFinder output from all 47 species
Solyc08g083300.4.1	UBP9, Solyc08g083300	deubiquitinase (UBP5\|8-11)	0.03	OrthoFinder output from all 47 species
Zm00001e008908_P001	ATUBP5, UBP5,...	deubiquitinase (UBP5\|8-11)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004843	cysteine-type deubiquitinase activity	IEA	Interproscan
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008234	cysteine-type peptidase activity	None	Extended
BP	GO:0016579	protein deubiquitination	IEA	Interproscan
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019783	ubiquitin-like protein peptidase activity	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070646	protein modification by small protein removal	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0101005	deubiquitinase activity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0004386	helicase activity	IEP	HCCA
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	HCCA
MF	GO:0004813	alanine-tRNA ligase activity	IEP	HCCA
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
BP	GO:0006399	tRNA metabolic process	IEP	HCCA
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	HCCA
BP	GO:0006419	alanyl-tRNA aminoacylation	IEP	HCCA
BP	GO:0006520	amino acid metabolic process	IEP	HCCA
BP	GO:0006904	vesicle docking involved in exocytosis	IEP	HCCA
BP	GO:0016192	vesicle-mediated transport	IEP	HCCA
MF	GO:0016874	ligase activity	IEP	HCCA
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	HCCA
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	HCCA
BP	GO:0022406	membrane docking	IEP	HCCA
BP	GO:0034660	ncRNA metabolic process	IEP	HCCA
BP	GO:0043038	amino acid activation	IEP	HCCA
BP	GO:0043039	tRNA aminoacylation	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
BP	GO:0048278	vesicle docking	IEP	HCCA
BP	GO:0051640	organelle localization	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
BP	GO:0140029	exocytic process	IEP	HCCA
BP	GO:0140056	organelle localization by membrane tethering	IEP	HCCA
MF	GO:0140098	catalytic activity, acting on RNA	IEP	HCCA
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	HCCA
MF	GO:0140640	catalytic activity, acting on a nucleic acid	IEP	HCCA
MF	GO:0140657	ATP-dependent activity	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001394	Peptidase_C19_UCH	313	910
IPR006615	Pept_C19_DUSP	41	137

External Links

No external refs found!

Zm00001e002683_P002 (UBP9, Zm00001e002683)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation