1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001e000530_P004

Zm00001e000530_P004 (Zm00001e000530)


Aliases : Zm00001e000530

Description : no hits & (original description: none)


Gene families : OG0001410 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001410_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e000530_P004

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00251390 SPD1,... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00021p00151130 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00099p00141900 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT1G33290 No alias P-loop containing nucleoside triphosphate hydrolases... 0.04 OrthoFinder output from all 47 species
Adi_g108757 SPD1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g112939 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g12619 SPD1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g15547 SPD1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene71144.t1 SPD1, Aspi01Gene71144 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g18558 SPD1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.34G074300.1 SPD1, Ceric.34G074300 not classified & original description: pacid=50622982... 0.02 OrthoFinder output from all 47 species
Dcu_g05731 SPD1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g11178 SPD1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_10727 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os12g10640.1 LOC_Os12g10640 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g18297 SPD1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10427944g0010 SPD1 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10433286g0010 SPD1 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp5g22990.1 SPD1 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g02253 SPD1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g10530 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g08230 SPD1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g09739 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo410877 SPD1 No description available 0.05 OrthoFinder output from all 47 species
Solyc12g014150.3.1 Solyc12g014150 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g26580 SPD1 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004827 proline-tRNA ligase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006433 prolyl-tRNA aminoacylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
MF GO:0008312 7S RNA binding IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
CC GO:0048500 signal recognition particle IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 178 269
No external refs found!