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  5. Gb_39518

Gb_39518


Description : STIG1/GRI precursor polypeptide


Gene families : OG0005894 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005894_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_39518

Target Alias Description ECC score Gene Family Method Actions
AT1G50650 No alias Stigma-specific Stig1 family protein 0.04 OrthoFinder output from all 47 species
AT1G50720 No alias Stigma-specific Stig1 family protein 0.03 OrthoFinder output from all 47 species
AT5G55110 No alias Stigma-specific Stig1 family protein 0.04 OrthoFinder output from all 47 species
Dcu_g02725 No alias STIG1/GRI precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
MA_815326g0010 No alias STIG1/GRI precursor polypeptide 0.02 OrthoFinder output from all 47 species
Mp5g16620.1 No alias STIG1/GRI precursor polypeptide 0.02 OrthoFinder output from all 47 species
Mp5g16630.1 No alias STIG1/GRI precursor polypeptide 0.03 OrthoFinder output from all 47 species
Mp5g16640.1 No alias STIG1/GRI precursor polypeptide 0.02 OrthoFinder output from all 47 species
Mp5g16650.1 No alias STIG1/GRI precursor polypeptide 0.02 OrthoFinder output from all 47 species
Solyc03g116450.1.1 Solyc03g116450 STIG1/GRI precursor polypeptide 0.03 OrthoFinder output from all 47 species
Solyc05g050730.1.1 Solyc05g050730 STIG1/GRI precursor polypeptide 0.05 OrthoFinder output from all 47 species
Solyc06g073220.1.1 Solyc06g073220 STIG1/GRI precursor polypeptide 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
InterPro domains Description Start Stop
IPR006969 Stig1 56 169
No external refs found!