Gb_38840 (NFD1)


Aliases : NFD1

Description : component mtRPL21 of large ribosomal subunit proteome


Gene families : OG0004500 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004500_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_38840

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00068p00183630 NFD1,... Protein biosynthesis.organelle translation... 0.03 OrthoFinder output from all 47 species
AT4G30930 NFD1 Ribosomal protein L21 0.05 OrthoFinder output from all 47 species
Aop_g07160 NFD1 component *(bL21m) of large mitoribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Azfi_s0001.g000513 NFD1 component *(bL21m) of large mitoribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Ceric.36G065300.1 NFD1, Ceric.36G065300 component *(bL21m) of large mitoribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Cre09.g388550 NFD1 No description available 0.02 OrthoFinder output from all 47 species
Dcu_g14758 NFD1 component *(bL21m) of large mitoribosomal-subunit... 0.03 OrthoFinder output from all 47 species
MA_10431350g0010 NFD1 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_747819g0010 NFD1 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp6g04500.1 NFD1 component mtRPL21 of large ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species
Sam_g13356 No alias component *(bL21m) of large mitoribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Sam_g13357 No alias component *(bL21m) of large mitoribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Tin_g21386 NFD1 component *(bL21m) of large mitoribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Zm00001e032388_P001 NFD1, Zm00001e032388 component mtRPL21 of large ribosomal subunit proteome 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005840 ribosome IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0008097 5S rRNA binding IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR028909 L21p-like 170 270
No external refs found!