Aliases : NFD1
Description : component mtRPL21 of large ribosomal subunit proteome
Gene families : OG0004500 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004500_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00068p00183630 | NFD1,... | Protein biosynthesis.organelle translation... | 0.03 | OrthoFinder output from all 47 species | |
AT4G30930 | NFD1 | Ribosomal protein L21 | 0.05 | OrthoFinder output from all 47 species | |
Aop_g07160 | NFD1 | component *(bL21m) of large mitoribosomal-subunit... | 0.02 | OrthoFinder output from all 47 species | |
Azfi_s0001.g000513 | NFD1 | component *(bL21m) of large mitoribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
Ceric.36G065300.1 | NFD1, Ceric.36G065300 | component *(bL21m) of large mitoribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
Cre09.g388550 | NFD1 | No description available | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g14758 | NFD1 | component *(bL21m) of large mitoribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
MA_10431350g0010 | NFD1 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
MA_747819g0010 | NFD1 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
Mp6g04500.1 | NFD1 | component mtRPL21 of large ribosomal subunit proteome | 0.03 | OrthoFinder output from all 47 species | |
Sam_g13356 | No alias | component *(bL21m) of large mitoribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g13357 | No alias | component *(bL21m) of large mitoribosomal-subunit... | 0.06 | OrthoFinder output from all 47 species | |
Tin_g21386 | NFD1 | component *(bL21m) of large mitoribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e032388_P001 | NFD1, Zm00001e032388 | component mtRPL21 of large ribosomal subunit proteome | 0.06 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0005840 | ribosome | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003697 | single-stranded DNA binding | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
MF | GO:0005198 | structural molecule activity | IEP | HCCA |
BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
BP | GO:0006412 | translation | IEP | HCCA |
BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
MF | GO:0008097 | 5S rRNA binding | IEP | HCCA |
MF | GO:0016874 | ligase activity | IEP | HCCA |
MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
MF | GO:0019843 | rRNA binding | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
BP | GO:0043038 | amino acid activation | IEP | HCCA |
BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
BP | GO:0043603 | amide metabolic process | IEP | HCCA |
BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR028909 | L21p-like | 170 | 270 |
No external refs found! |