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  5. Gb_34873

Gb_34873


Description : LRR receptor-like serine/threonine-protein kinase GSO1 OS=Arabidopsis thaliana (sp|c0lgq5|gso1_arath : 393.0)


Gene families : OG0002518 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002518_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_34873
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
AT3G12145 FLR1, FLOR1 Leucine-rich repeat (LRR) family protein 0.02 OrthoFinder output from all 47 species
AT5G06860 ATPGIP1, PGIP1 polygalacturonase inhibiting protein 1 0.07 OrthoFinder output from all 47 species
GSVIVT01033370001 ATPGIP1, PGIP1 Polygalacturonase inhibitor OS=Vitis vinifera 0.04 OrthoFinder output from all 47 species
Gb_04975 No alias Receptor-like protein Cf-9 homolog OS=Solanum... 0.04 OrthoFinder output from all 47 species
LOC_Os05g01370.1 LOC_Os05g01370 pathogen polygalacturonase inhibitor (PGIP) 0.07 OrthoFinder output from all 47 species
LOC_Os05g01380.1 PGIP2, ATPGIP2,... pathogen polygalacturonase inhibitor (PGIP) 0.04 OrthoFinder output from all 47 species
LOC_Os05g01444.1 ATPGIP1, PGIP1,... pathogen polygalacturonase inhibitor (PGIP) 0.02 OrthoFinder output from all 47 species
LOC_Os08g39940.1 ATPGIP1, PGIP1,... Polygalacturonase inhibitor 1 OS=Oryza sativa subsp.... 0.04 OrthoFinder output from all 47 species
MA_10432014g0010 No alias Receptor-like protein 9DC2 OS=Solanum pimpinellifolium... 0.03 OrthoFinder output from all 47 species
MA_10432079g0010 No alias Probable leucine-rich repeat receptor-like protein... 0.04 OrthoFinder output from all 47 species
MA_10434490g0010 No alias Receptor-like protein Cf-9 homolog OS=Solanum... 0.05 OrthoFinder output from all 47 species
MA_10435244g0010 No alias Receptor-like protein 9DC3 OS=Solanum pimpinellifolium... 0.03 OrthoFinder output from all 47 species
MA_111039g0020 No alias Receptor-like protein 9DC3 OS=Solanum pimpinellifolium... 0.04 OrthoFinder output from all 47 species
MA_170534g0010 No alias Tyrosine-sulfated glycopeptide receptor 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_173871g0010 FLS2 Receptor-like protein 9DC3 OS=Solanum pimpinellifolium... 0.04 OrthoFinder output from all 47 species
MA_177399g0010 No alias no description available(sp|f4j8g2|rlp33_arath : 116.0) 0.07 OrthoFinder output from all 47 species
MA_215266g0020 No alias Receptor-like protein 9DC3 OS=Solanum pimpinellifolium... 0.03 OrthoFinder output from all 47 species
MA_307887g0010 No alias Probable inactive leucine-rich repeat receptor kinase... 0.05 OrthoFinder output from all 47 species
MA_478919g0010 PSKR2, AtPSKR2 LRR receptor-like serine/threonine-protein kinase FLS2... 0.05 OrthoFinder output from all 47 species
MA_803538g0010 No alias Receptor like protein 21 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
MA_82361g0020 FLS2 no description available(sp|f4j8g2|rlp33_arath : 109.0) 0.03 OrthoFinder output from all 47 species
MA_827806g0010 No alias Receptor-like protein 9DC2 OS=Solanum pimpinellifolium... 0.03 OrthoFinder output from all 47 species
MA_9032753g0010 No alias LRR receptor-like serine/threonine-protein kinase FLS2... 0.04 OrthoFinder output from all 47 species
MA_9034452g0010 No alias Receptor-like protein 9DC3 OS=Solanum pimpinellifolium... 0.05 OrthoFinder output from all 47 species
MA_9792225g0010 No alias Receptor-like protein 9DC3 OS=Solanum pimpinellifolium... 0.03 OrthoFinder output from all 47 species
Solyc09g014480.3.1 PGIP2, ATPGIP2,... pathogen polygalacturonase inhibitor (PGIP) 0.06 OrthoFinder output from all 47 species
Solyc09g014590.3.1 FLR1, FLOR1,... pathogen polygalacturonase inhibitor (PGIP) 0.02 OrthoFinder output from all 47 species
Zm00001e029700_P001 ATPGIP1, PGIP1,... pathogen polygalacturonase inhibitor (PGIP) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 435 486
IPR001611 Leu-rich_rpt 331 390
IPR001611 Leu-rich_rpt 571 627
IPR001611 Leu-rich_rpt 64 85
No external refs found!