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  5. Gb_30810

Gb_30810 (SRCAP, PIE1, chr13)


Aliases : SRCAP, PIE1, chr13

Description : ATPase component PIE1 of SWR1 chromatin remodeling complex


Gene families : OG0002986 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002986_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_30810

Target Alias Description ECC score Gene Family Method Actions
AT3G12810 SRCAP, PIE1, chr13 SNF2 domain-containing protein / helicase... 0.05 OrthoFinder output from all 47 species
Adi_g086891 SRCAP, PIE1, chr13 ATPase component *(PIE1) of SWR1 chromatin remodeling... 0.03 OrthoFinder output from all 47 species
Aev_g17049 SRCAP, PIE1, chr13 ATPase component *(PIE1) of SWR1 chromatin remodeling... 0.03 OrthoFinder output from all 47 species
Als_g04504 SRCAP, PIE1, chr13 ATPase component *(PIE1) of SWR1 chromatin remodeling... 0.03 OrthoFinder output from all 47 species
Aop_g13991 SRCAP, PIE1, chr13 ATPase component *(PIE1) of SWR1 chromatin remodeling... 0.02 OrthoFinder output from all 47 species
Azfi_s0329.g065325 SRCAP, PIE1, chr13 ATPase component *(PIE1) of SWR1 chromatin remodeling... 0.03 OrthoFinder output from all 47 species
Cba_g12343 SRCAP, PIE1, chr13 ATPase component *(PIE1) of SWR1 chromatin remodeling... 0.02 OrthoFinder output from all 47 species
Ceric.22G011100.1 SRCAP, PIE1,... ATPase component *(PIE1) of SWR1 chromatin remodeling... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000194.26 SRCAP, PIE1, chr13 Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1... 0.02 OrthoFinder output from all 47 species
Cre14.g618860 SRCAP, PIE1, chr13 Chromatin organisation.chromatin remodeling... 0.01 OrthoFinder output from all 47 species
Dcu_g08326 SRCAP, PIE1, chr13 ATPase component *(PIE1) of SWR1 chromatin remodeling... 0.02 OrthoFinder output from all 47 species
GSVIVT01033511001 SRCAP, PIE1, chr13 Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1... 0.03 OrthoFinder output from all 47 species
LOC_Os02g46450.2 SRCAP, PIE1,... ATPase component PIE1 of SWR1 chromatin remodeling complex 0.04 OrthoFinder output from all 47 species
MA_424432g0010 SRCAP, PIE1, chr13 ATPase component PIE1 of SWR1 chromatin remodeling complex 0.04 OrthoFinder output from all 47 species
MA_64269g0010 SRCAP, PIE1, chr13 Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1... 0.04 OrthoFinder output from all 47 species
Mp7g15670.1 SRCAP, PIE1, chr13 ATPase component PIE1 of SWR1 chromatin remodeling complex 0.02 OrthoFinder output from all 47 species
Nbi_g13998 SRCAP, PIE1, chr13 ATPase component *(PIE1) of SWR1 chromatin remodeling... 0.02 OrthoFinder output from all 47 species
Ppi_g56964 SRCAP, PIE1, chr13 ATPase component *(PIE1) of SWR1 chromatin remodeling... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0012.g005513 SRCAP, PIE1, chr13 ATPase component *(PIE1) of SWR1 chromatin remodeling... 0.02 OrthoFinder output from all 47 species
Solyc03g063210.3.1 SRCAP, PIE1,... Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1... 0.04 OrthoFinder output from all 47 species
Solyc03g063220.2.1 SRCAP, PIE1,... ATPase component PIE1 of SWR1 chromatin remodeling complex 0.07 OrthoFinder output from all 47 species
Zm00001e015483_P001 SRCAP, PIE1,... ATPase component PIE1 of SWR1 chromatin remodeling complex 0.03 OrthoFinder output from all 47 species
Zm00001e023267_P001 SRCAP, PIE1,... ATPase component PIE1 of SWR1 chromatin remodeling complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
CC GO:0008287 protein serine/threonine phosphatase complex IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
MF GO:0019208 phosphatase regulator activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019888 protein phosphatase regulator activity IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
CC GO:1903293 phosphatase complex IEP HCCA
InterPro domains Description Start Stop
IPR000330 SNF2_N 3 275
IPR001650 Helicase_C 531 640
No external refs found!