- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : no hits & (original description: none)
Gene families : OG0002247 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002247_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Gb_29158 | |
| Cluster | HCCA: Cluster_41 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00060p00030440 | evm_27.TU.AmTr_v1... | No description available | 0.1 | OrthoFinder output from all 47 species | |
| AT3G50370 | No alias | unknown protein; FUNCTIONS IN: molecular_function... | 0.15 | OrthoFinder output from all 47 species | |
| Adi_g078021 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g04200 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ala_g11352 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g11493 | No alias | not classified & original description: none | 0.09 | OrthoFinder output from all 47 species | |
| Als_g21096 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Aob_g33206 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0010.g012042 | No alias | not classified & original description: CDS=1-7353 | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.27G046700.1 | Ceric.27G046700 | not classified & original description: pacid=50605982... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.28G036600.1 | Ceric.28G036600 | not classified & original description: pacid=50570758... | 0.07 | OrthoFinder output from all 47 species | |
| Ceric.30G074300.1 | Ceric.30G074300 | not classified & original description: pacid=50608333... | 0.05 | OrthoFinder output from all 47 species | |
| Cre01.g013600 | No alias | No description available | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g43331 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Ehy_g13893 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g18184 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01022139001 | No alias | No description available | 0.11 | OrthoFinder output from all 47 species | |
| LOC_Os03g27820.1 | LOC_Os03g27820 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| Lfl_g24408 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| MA_10431352g0010 | No alias | no hits & (original description: none) | 0.13 | OrthoFinder output from all 47 species | |
| Mp3g23710.1 | No alias | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| Nbi_g02514 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g08425 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g18806 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g37179 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g41533 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Pnu_g07051 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g22845 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g25396 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g18938 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0144.g022955 | No alias | not classified & original description: CDS=1-6579 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g30189 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo440052 | No alias | No description available | 0.14 | OrthoFinder output from all 47 species | |
| Solyc02g090760.4.1 | Solyc02g090760 | no hits & (original description: none) | 0.12 | OrthoFinder output from all 47 species | |
| Spa_g17784 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g10051 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e001911_P001 | Zm00001e001911 | no hits & (original description: none) | 0.09 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | IEP | HCCA |
| BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0004674 | protein serine/threonine kinase activity | IEP | HCCA |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006401 | RNA catabolic process | IEP | HCCA |
| BP | GO:0006402 | mRNA catabolic process | IEP | HCCA |
| BP | GO:0006479 | protein methylation | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| MF | GO:0008170 | N-methyltransferase activity | IEP | HCCA |
| BP | GO:0008213 | protein alkylation | IEP | HCCA |
| MF | GO:0008276 | protein methyltransferase activity | IEP | HCCA |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | HCCA |
| BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
| BP | GO:0009892 | negative regulation of metabolic process | IEP | HCCA |
| BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0010629 | negative regulation of gene expression | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| MF | GO:0016278 | lysine N-methyltransferase activity | IEP | HCCA |
| MF | GO:0016279 | protein-lysine N-methyltransferase activity | IEP | HCCA |
| BP | GO:0016570 | histone modification | IEP | HCCA |
| BP | GO:0016571 | histone methylation | IEP | HCCA |
| MF | GO:0016740 | transferase activity | IEP | HCCA |
| BP | GO:0018022 | peptidyl-lysine methylation | IEP | HCCA |
| MF | GO:0018024 | histone lysine N-methyltransferase activity | IEP | HCCA |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
| BP | GO:0018205 | peptidyl-lysine modification | IEP | HCCA |
| BP | GO:0019439 | aromatic compound catabolic process | IEP | HCCA |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
| BP | GO:0032259 | methylation | IEP | HCCA |
| BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | HCCA |
| BP | GO:0034968 | histone lysine methylation | IEP | HCCA |
| MF | GO:0042054 | histone methyltransferase activity | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0043414 | macromolecule methylation | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
| BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | HCCA |
| BP | GO:0046700 | heterocycle catabolic process | IEP | HCCA |
| BP | GO:0048519 | negative regulation of biological process | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
| BP | GO:1901361 | organic cyclic compound catabolic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |