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  5. Gb_24971

Gb_24971


Description : effector receptor (NLR)


Gene families : OG0005746 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005746_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_24971
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
Gb_00186 TIR effector receptor (NLR) 0.06 OrthoFinder output from all 47 species
Gb_03100 No alias effector receptor (NLR) 0.04 OrthoFinder output from all 47 species
Gb_04885 No alias effector receptor (NLR) 0.08 OrthoFinder output from all 47 species
Gb_04892 No alias effector receptor (NLR) 0.07 OrthoFinder output from all 47 species
Gb_06632 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
Gb_07604 No alias effector receptor (NLR) 0.04 OrthoFinder output from all 47 species
Gb_08647 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
Gb_16324 No alias effector receptor (NLR) 0.01 OrthoFinder output from all 47 species
Gb_22272 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
Gb_22712 No alias effector receptor (NLR) 0.04 OrthoFinder output from all 47 species
Gb_25612 No alias Disease resistance protein TAO1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_26063 No alias effector receptor (NLR) 0.04 OrthoFinder output from all 47 species
Gb_27298 No alias effector receptor (NLR) 0.05 OrthoFinder output from all 47 species
Gb_29937 No alias effector receptor (NLR) 0.04 OrthoFinder output from all 47 species
Gb_37380 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
Gb_40968 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
BP GO:0007165 signal transduction IEA Interproscan
MF GO:0043531 ADP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR002182 NB-ARC 295 533
IPR000157 TIR_dom 119 275
No external refs found!