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  5. Gb_22108

Gb_22108


Description : ferredoxin electron carrier


Gene families : OG0000635 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000635_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_22108
Cluster HCCA: Cluster_88

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00070p00129320 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.linear electron... 0.1 OrthoFinder output from all 47 species
AT1G60950 FED A, ATFD2 2Fe-2S ferredoxin-like superfamily protein 0.12 OrthoFinder output from all 47 species
Aev_g01896 FED A, ATFD2 ferredoxin targeted to NADP reduction & original... 0.03 OrthoFinder output from all 47 species
Aev_g42524 FED A, ATFD2 ferredoxin targeted to NADP reduction & original... 0.04 OrthoFinder output from all 47 species
Aob_g10567 FD1, ATFD1 ferredoxin targeted to NADP reduction & original... 0.04 OrthoFinder output from all 47 species
Aob_g13116 FED A, ATFD2 ferredoxin targeted to NADP reduction & original... 0.03 OrthoFinder output from all 47 species
Aob_g16047 FD1, ATFD1 ferredoxin targeted to NADP reduction & original... 0.07 OrthoFinder output from all 47 species
Aob_g32125 FED A, ATFD2 ferredoxin targeted to NADP reduction & original... 0.02 OrthoFinder output from all 47 species
Aop_g05087 FD1, ATFD1 ferredoxin targeted to NADP reduction & original... 0.1 OrthoFinder output from all 47 species
Aop_g15655 FED A, ATFD2 ferredoxin targeted to NADP reduction & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0006.g009850 FD1, ATFD1 ferredoxin targeted to NADP reduction & original... 0.03 OrthoFinder output from all 47 species
Ceric.13G078000.1 FD1, ATFD1,... ferredoxin targeted to NADP reduction & original... 0.12 OrthoFinder output from all 47 species
Cre14.g626700 FD1, ATFD1 Photosynthesis.photophosphorylation.linear electron... 0.13 OrthoFinder output from all 47 species
Dac_g14348 FED A, ATFD2 ferredoxin targeted to NADP reduction & original... 0.08 OrthoFinder output from all 47 species
Dac_g14349 FED A, ATFD2 ferredoxin targeted to NADP reduction & original... 0.07 OrthoFinder output from all 47 species
Dcu_g50350 FED A, ATFD2 ferredoxin targeted to NADP reduction & original... 0.22 OrthoFinder output from all 47 species
Ehy_g01897 FD1, ATFD1 ferredoxin targeted to NADP reduction & original... 0.04 OrthoFinder output from all 47 species
LOC_Os08g01380.1 FED A, ATFD2,... ferredoxin electron carrier 0.06 OrthoFinder output from all 47 species
Len_g55855 FD1, ATFD1 ferredoxin targeted to NADP reduction & original... 0.04 OrthoFinder output from all 47 species
Lfl_g20268 FD1, ATFD1 ferredoxin targeted to NADP reduction & original... 0.02 OrthoFinder output from all 47 species
Mp2g15250.1 FD1, ATFD1 ferredoxin electron carrier 0.08 OrthoFinder output from all 47 species
Msp_g05782 FD1, ATFD1 ferredoxin targeted to NADP reduction & original... 0.06 OrthoFinder output from all 47 species
Ore_g14958 FED A, ATFD2 ferredoxin targeted to NADP reduction & original... 0.09 OrthoFinder output from all 47 species
Pir_g11037 FD1, ATFD1 ferredoxin targeted to NADP reduction & original... 0.02 OrthoFinder output from all 47 species
Pnu_g29158 FD1, ATFD1 ferredoxin targeted to NADP reduction & original... 0.04 OrthoFinder output from all 47 species
Pp3c4_8330V3.1 FED A, ATFD2, Pp3c4_8330 2Fe-2S ferredoxin-like superfamily protein 0.04 OrthoFinder output from all 47 species
Ppi_g00520 FED A, ATFD2 ferredoxin targeted to NADP reduction & original... 0.04 OrthoFinder output from all 47 species
Ppi_g20441 FED A, ATFD2 ferredoxin targeted to NADP reduction & original... 0.03 OrthoFinder output from all 47 species
Ppi_g62420 FD1, ATFD1 ferredoxin targeted to NADP reduction & original... 0.03 OrthoFinder output from all 47 species
Smo236581 FED A, ATFD2 Photosynthesis.photophosphorylation.linear electron... 0.08 OrthoFinder output from all 47 species
Solyc10g044520.3.1 FED A, ATFD2,... ferredoxin electron carrier 0.1 OrthoFinder output from all 47 species
Tin_g21014 FD1, ATFD1 ferredoxin targeted to NADP reduction & original... 0.06 OrthoFinder output from all 47 species
Zm00001e029127_P002 FED A, ATFD2,... ferredoxin electron carrier 0.12 OrthoFinder output from all 47 species
Zm00001e029128_P001 FED A, ATFD2,... ferredoxin electron carrier 0.13 OrthoFinder output from all 47 species
Zm00001e029129_P001 FED A, ATFD2,... ferredoxin electron carrier 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
MF GO:0030145 manganese ion binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!