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Description : component NOT1 of mRNA deadenylation CCR4-NOT complex
Gene families : OG0002046 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002046_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00106p00133350 | evm_27.TU.AmTr_v1... | RNA processing.RNA decay.deadenylation-dependent... | 0.08 | OrthoFinder output from all 47 species | |
| AT1G02080 | No alias | transcription regulators | 0.07 | OrthoFinder output from all 47 species | |
| Adi_g055874 | No alias | scaffold component *(NOT1) of mRNA deadenylation... | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g11138 | No alias | scaffold component *(NOT1) of mRNA deadenylation... | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g12815 | No alias | scaffold component *(NOT1) of mRNA deadenylation... | 0.06 | OrthoFinder output from all 47 species | |
| Aob_g22134 | No alias | scaffold component *(NOT1) of mRNA deadenylation... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g06241 | No alias | scaffold component *(NOT1) of mRNA deadenylation... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0065.g035985 | No alias | scaffold component *(NOT1) of mRNA deadenylation... | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g12926 | No alias | scaffold component *(NOT1) of mRNA deadenylation... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.34G056500.1 | Ceric.34G056500 | scaffold component *(NOT1) of mRNA deadenylation... | 0.06 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000767.19 | No alias | RNA processing.RNA decay.deadenylation-dependent... | 0.04 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000767.20 | No alias | No description available | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g28625 | No alias | scaffold component *(NOT1) of mRNA deadenylation... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g02066 | No alias | scaffold component *(NOT1) of mRNA deadenylation... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g17663 | No alias | scaffold component *(NOT1) of mRNA deadenylation... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01000874001 | No alias | RNA processing.RNA decay.deadenylation-dependent... | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01018721001 | No alias | RNA processing.RNA decay.deadenylation-dependent... | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os10g40780.1 | LOC_Os10g40780 | component NOT1 of mRNA deadenylation CCR4-NOT complex | 0.03 | OrthoFinder output from all 47 species | |
| Len_g12091 | No alias | scaffold component *(NOT1) of mRNA deadenylation... | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g10188 | No alias | scaffold component *(NOT1) of mRNA deadenylation... | 0.06 | OrthoFinder output from all 47 species | |
| MA_100304g0010 | No alias | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| MA_42843g0010 | No alias | component NOT1 of mRNA deadenylation CCR4-NOT complex | 0.03 | OrthoFinder output from all 47 species | |
| Mp3g11860.1 | No alias | component NOT1 of mRNA deadenylation CCR4-NOT complex | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g16116 | No alias | scaffold component *(NOT1) of mRNA deadenylation... | 0.09 | OrthoFinder output from all 47 species | |
| Ppi_g22265 | No alias | scaffold component *(NOT1) of mRNA deadenylation... | 0.05 | OrthoFinder output from all 47 species | |
| Sam_g40588 | No alias | scaffold component *(NOT1) of mRNA deadenylation... | 0.05 | OrthoFinder output from all 47 species | |
| Smo440060 | No alias | RNA processing.RNA decay.deadenylation-dependent... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g090780.3.1 | Solyc01g090780 | component NOT1 of mRNA deadenylation CCR4-NOT complex | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g42101 | No alias | scaffold component *(NOT1) of mRNA deadenylation... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g16815 | No alias | scaffold component *(NOT1) of mRNA deadenylation... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e000031_P001 | Zm00001e000031 | component NOT1 of mRNA deadenylation CCR4-NOT complex | 0.07 | OrthoFinder output from all 47 species | |
| Zm00001e039114_P001 | Zm00001e039114 | component NOT1 of mRNA deadenylation CCR4-NOT complex | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000159 | protein phosphatase type 2A complex | IEP | HCCA |
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0004672 | protein kinase activity | IEP | HCCA |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
| BP | GO:0006468 | protein phosphorylation | IEP | HCCA |
| BP | GO:0006813 | potassium ion transport | IEP | HCCA |
| CC | GO:0008287 | protein serine/threonine phosphatase complex | IEP | HCCA |
| MF | GO:0015079 | potassium ion transmembrane transporter activity | IEP | HCCA |
| BP | GO:0016310 | phosphorylation | IEP | HCCA |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0019208 | phosphatase regulator activity | IEP | HCCA |
| MF | GO:0019888 | protein phosphatase regulator activity | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| BP | GO:0034220 | monoatomic ion transmembrane transport | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| MF | GO:0042578 | phosphoric ester hydrolase activity | IEP | HCCA |
| BP | GO:0043038 | amino acid activation | IEP | HCCA |
| BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| MF | GO:0046873 | metal ion transmembrane transporter activity | IEP | HCCA |
| BP | GO:0071805 | potassium ion transmembrane transport | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| BP | GO:0098655 | monoatomic cation transmembrane transport | IEP | HCCA |
| BP | GO:0098660 | inorganic ion transmembrane transport | IEP | HCCA |
| BP | GO:0098662 | inorganic cation transmembrane transport | IEP | HCCA |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| CC | GO:1903293 | phosphatase complex | IEP | HCCA |
| No external refs found! |