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  5. Gb_11771

Gb_11771


Description : plant-specific stabilizing component ClpT of chloroplast Clp-type protease complex


Gene families : OG0007488 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007488_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_11771

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene18165.t2 Aspi01Gene18165 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0072.g037001 No alias plant-specific stabilizing component *(ClpT) of... 0.02 OrthoFinder output from all 47 species
Sam_g11082 No alias plant-specific stabilizing component *(ClpT) of... 0.03 OrthoFinder output from all 47 species
Zm00001e038581_P001 Zm00001e038581 plant-specific stabilizing component ClpT of chloroplast... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004813 alanine-tRNA ligase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006419 alanyl-tRNA aminoacylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR004176 Clp_R_dom 197 236
IPR004176 Clp_R_dom 111 163
No external refs found!