Gb_11417

Description : Putative potassium transporter 12 OS=Arabidopsis thaliana (sp|o80739|pot12_arath : 224.0)

Gene families : OG0000055 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_11417

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00125p00118080	KUP10,...	Solute transport.carrier-mediated transport.APC...	0.06	OrthoFinder output from all 47 species
Ala_g14339	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g16397	No alias	potassium cation transporter *(HAK/KUP/KT) & original...	0.02	OrthoFinder output from all 47 species
Aspi01Gene37479.t2	KUP1, ATKT1P,...	potassium cation transporter *(HAK/KUP/KT) & original...	0.04	OrthoFinder output from all 47 species
Aspi01Gene48479.t1	HAK5, ATHAK5,...	potassium cation transporter *(HAK/KUP/KT) & original...	0.03	OrthoFinder output from all 47 species
Azfi_s0006.g010395	No alias	potassium cation transporter *(HAK/KUP/KT) & original...	0.04	OrthoFinder output from all 47 species
Cba_g25357	ATKT4, KUP3, ATKUP3	potassium cation transporter *(HAK/KUP/KT) & original...	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000455.43	No alias	Potassium transporter 2 OS=Arabidopsis thaliana	0.01	OrthoFinder output from all 47 species
Dcu_g05712	KUP1, ATKT1P,...	potassium cation transporter *(HAK/KUP/KT) & original...	0.02	OrthoFinder output from all 47 species
Dcu_g39862	HAK5, ATHAK5	potassium cation transporter *(HAK/KUP/KT) & original...	0.01	OrthoFinder output from all 47 species
Ehy_g01478	KUP1, ATKT1P,...	potassium cation transporter *(HAK/KUP/KT) & original...	0.04	OrthoFinder output from all 47 species
Ehy_g25530	KUP1, ATKT1P,...	potassium cation transporter *(HAK/KUP/KT) & original...	0.02	OrthoFinder output from all 47 species
LOC_Os04g52120.1	KUP7, LOC_Os04g52120	potassium cation transporter (HAK/KUP/KT)	0.02	OrthoFinder output from all 47 species
Pir_g05283	No alias	potassium cation transporter *(HAK/KUP/KT) & original...	0.04	OrthoFinder output from all 47 species
Pnu_g10083	HAK5, ATHAK5	potassium cation transporter *(HAK/KUP/KT) & original...	0.03	OrthoFinder output from all 47 species
Ppi_g18105	KUP10	potassium cation transporter *(HAK/KUP/KT) & original...	0.02	OrthoFinder output from all 47 species
Ppi_g40835	No alias	potassium cation transporter *(HAK/KUP/KT) & original...	0.01	OrthoFinder output from all 47 species
Sam_g26511	No alias	potassium cation transporter *(HAK/KUP/KT) & original...	0.02	OrthoFinder output from all 47 species
Spa_g32950	KUP1, ATKT1P,...	potassium cation transporter *(HAK/KUP/KT) & original...	0.02	OrthoFinder output from all 47 species
Tin_g16980	KUP10	potassium cation transporter *(HAK/KUP/KT) & original...	0.03	OrthoFinder output from all 47 species
Tin_g25532	No alias	potassium cation transporter *(HAK/KUP/KT) & original...	0.02	OrthoFinder output from all 47 species
Tin_g27457	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	monoatomic ion transport	None	Extended
BP	GO:0006812	monoatomic cation transport	None	Extended
BP	GO:0006813	potassium ion transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008324	monoatomic cation transmembrane transporter activity	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015075	monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0015079	potassium ion transmembrane transporter activity	IEA	Interproscan
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0022890	inorganic cation transmembrane transporter activity	None	Extended
BP	GO:0030001	metal ion transport	None	Extended
BP	GO:0034220	monoatomic ion transmembrane transport	None	Extended
MF	GO:0046873	metal ion transmembrane transporter activity	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	None	Extended
BP	GO:0071805	potassium ion transmembrane transport	IEA	Interproscan
BP	GO:0098655	monoatomic cation transmembrane transport	None	Extended
BP	GO:0098660	inorganic ion transmembrane transport	None	Extended
BP	GO:0098662	inorganic cation transmembrane transport	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	HCCA
MF	GO:0003677	DNA binding	IEP	HCCA
MF	GO:0003899	DNA-directed 5'-3' RNA polymerase activity	IEP	HCCA
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0006351	DNA-templated transcription	IEP	HCCA
BP	GO:0006399	tRNA metabolic process	IEP	HCCA
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	HCCA
BP	GO:0006520	amino acid metabolic process	IEP	HCCA
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	HCCA
BP	GO:0006807	nitrogen compound metabolic process	IEP	HCCA
BP	GO:0009058	biosynthetic process	IEP	HCCA
BP	GO:0009059	macromolecule biosynthetic process	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
MF	GO:0016779	nucleotidyltransferase activity	IEP	HCCA
MF	GO:0016874	ligase activity	IEP	HCCA
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	HCCA
MF	GO:0017076	purine nucleotide binding	IEP	HCCA
BP	GO:0018130	heterocycle biosynthetic process	IEP	HCCA
BP	GO:0019438	aromatic compound biosynthetic process	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
BP	GO:0032774	RNA biosynthetic process	IEP	HCCA
MF	GO:0034062	5'-3' RNA polymerase activity	IEP	HCCA
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	HCCA
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	HCCA
BP	GO:0034660	ncRNA metabolic process	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	HCCA
BP	GO:0043038	amino acid activation	IEP	HCCA
BP	GO:0043039	tRNA aminoacylation	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
BP	GO:0043170	macromolecule metabolic process	IEP	HCCA
BP	GO:0044237	cellular metabolic process	IEP	HCCA
BP	GO:0044249	cellular biosynthetic process	IEP	HCCA
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	HCCA
BP	GO:0046483	heterocycle metabolic process	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA
BP	GO:0097659	nucleic acid-templated transcription	IEP	HCCA
MF	GO:0097747	RNA polymerase activity	IEP	HCCA
MF	GO:0140098	catalytic activity, acting on RNA	IEP	HCCA
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	HCCA
MF	GO:0140640	catalytic activity, acting on a nucleic acid	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA
BP	GO:1901360	organic cyclic compound metabolic process	IEP	HCCA
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA
BP	GO:1901576	organic substance biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003855	K+_transporter	137	285

External Links

No external refs found!

Gb_11417

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation