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  5. Gb_10941

Gb_10941


Description : no hits & (original description: none)


Gene families : OG0003819 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003819_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_10941
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
AT3G50380 No alias Protein of unknown function (DUF1162) 0.15 OrthoFinder output from all 47 species
Azfi_s0016.g014215 No alias not classified & original description: CDS=1-8898 0.05 OrthoFinder output from all 47 species
Ceric.20G047500.1 Ceric.20G047500 not classified & original description: pacid=50567577... 0.04 OrthoFinder output from all 47 species
MA_10433872g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10437277g0010 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
MA_10437277g0030 No alias no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Sacu_v1.1_s0074.g017189 No alias not classified & original description: CDS=326-9778 0.05 OrthoFinder output from all 47 species
Solyc02g090130.4.1 Solyc02g090130 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g17802 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e003108_P001 Zm00001e003108 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0004402 histone acetyltransferase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
MF GO:0034212 peptide N-acetyltransferase activity IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!