Gb_08421 (BAM1, BMY7, TR-BAMY)

Aliases : BAM1, BMY7, TR-BAMY

Description : beta amylase

Gene families : OG0000477 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000477_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_08421
Cluster	HCCA: Cluster_138

Target	Alias	Description	ECC score	Gene Family Method
AT3G23920	BAM1, BMY7, TR-BAMY	beta-amylase 1	0.03	OrthoFinder output from all 47 species
Ceric.02G049300.1	BAM1, BMY7,...	EC_3.2 glycosylase & original description:...	0.04	OrthoFinder output from all 47 species
Cre06.g270350	BMY8, BAM3, CT-BMY	Carbohydrate metabolism.starch...	0.02	OrthoFinder output from all 47 species
Dac_g10032	BAM1, BMY7, TR-BAMY	EC_3.2 glycosylase & original description: none	0.03	OrthoFinder output from all 47 species
Gb_26014	BMY8, BAM3, CT-BMY	beta amylase	0.03	OrthoFinder output from all 47 species
Lfl_g11780	BAM1, BMY7, TR-BAMY	EC_3.2 glycosylase & original description: none	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000272	polysaccharide catabolic process	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0016052	carbohydrate catabolic process	None	Extended
MF	GO:0016160	amylase activity	None	Extended
MF	GO:0016161	beta-amylase activity	IEA	Interproscan
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	HCCA
MF	GO:0015291	secondary active transmembrane transporter activity	IEP	HCCA
MF	GO:0015297	antiporter activity	IEP	HCCA
BP	GO:0016567	protein ubiquitination	IEP	HCCA
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	HCCA
MF	GO:0022804	active transmembrane transporter activity	IEP	HCCA
BP	GO:0032446	protein modification by small protein conjugation	IEP	HCCA
MF	GO:0042910	xenobiotic transmembrane transporter activity	IEP	HCCA
MF	GO:0043565	sequence-specific DNA binding	IEP	HCCA
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001554	Glyco_hydro_14	156	581

External Links

No external refs found!