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  5. Gb_06473

Gb_06473 (DegP9)


Aliases : DegP9

Description : protease (Deg)


Gene families : OG0000580 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000580_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_06473

Target Alias Description ECC score Gene Family Method Actions
AT5G40200 DegP9 DegP protease 9 0.03 OrthoFinder output from all 47 species
Ala_g17032 DegP9 protease *(Deg) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g21854 DegP9 protease *(Deg) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g58687 DegP9 protease *(Deg) & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001094.14 DegP9 Protein degradation.peptidase families.serine-type... 0.02 OrthoFinder output from all 47 species
Cre13.g579901 DegP9 Protein degradation.peptidase families.serine-type... 0.02 OrthoFinder output from all 47 species
Ehy_g14539 DegP10 protease *(Deg) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01003912001 DegP10 Protein degradation.peptidase families.serine-type... 0.03 OrthoFinder output from all 47 species
LOC_Os05g34460.1 DegP10, LOC_Os05g34460 protease (Deg) 0.03 OrthoFinder output from all 47 species
MA_17181g0010 DegP9 protease (Deg) 0.06 OrthoFinder output from all 47 species
Mp1g05470.1 DegP9 protease (Deg) 0.02 OrthoFinder output from all 47 species
Mp5g11110.1 DegP10 protease (Deg) 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0095.g019296 DegP9 protease *(Deg) & original description: CDS=177-2603 0.03 OrthoFinder output from all 47 species
Sam_g28821 No alias protease *(Deg) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc12g026400.2.1 DegP9, Solyc12g026400 protease (Deg) 0.04 OrthoFinder output from all 47 species
Zm00001e015791_P002 DegP9, Zm00001e015791 protease (Deg) 0.02 OrthoFinder output from all 47 species
Zm00001e031683_P001 DegP10, Zm00001e031683 protease (Deg) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006476 protein deacetylation IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016575 histone deacetylation IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0035601 protein deacylation IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0098732 macromolecule deacylation IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR041517 DEGP_PDZ 481 566
IPR017956 AT_hook_DNA-bd_motif 7 18
IPR017956 AT_hook_DNA-bd_motif 64 73
No external refs found!