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  5. Gb_06380

Gb_06380 (ATXYL1, XYL1, TRG1)


Aliases : ATXYL1, XYL1, TRG1

Description : 1,6-alpha-xylosidase


Gene families : OG0001972 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001972_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_06380

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00079p00038550 ATXYL1, XYL1,... Cell wall.hemicellulose.xyloglucan.modification and... 0.04 OrthoFinder output from all 47 species
AT1G68560 ATXYL1, XYL1, TRG1 alpha-xylosidase 1 0.02 OrthoFinder output from all 47 species
Als_g08905 ATXYL1, XYL1, TRG1 EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g37687 ATXYL1, XYL1, TRG1 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g12611 ATXYL1, XYL1, TRG1 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g30299 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01011904001 ATXYL1, XYL1, TRG1 Cell wall.hemicellulose.xyloglucan.modification and... 0.03 OrthoFinder output from all 47 species
Gb_01074 ATXYL1, XYL1, TRG1 1,6-alpha-xylosidase 0.03 OrthoFinder output from all 47 species
Mp8g10230.1 ATXYL1, XYL1, TRG1 1,6-alpha-xylosidase 0.04 OrthoFinder output from all 47 species
Mp8g10240.1 ATXYL1, XYL1, TRG1 1,6-alpha-xylosidase 0.02 OrthoFinder output from all 47 species
Solyc02g069670.4.1 Solyc02g069670 Alpha-glucosidase OS=Spinacia oleracea... 0.03 OrthoFinder output from all 47 species
Zm00001e017022_P001 ATXYL1, XYL1,... 1,6-alpha-xylosidase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0007155 cell adhesion IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR031727 Gal_mutarotase_N 40 172
IPR025887 Glyco_hydro_31_N_dom 176 240
IPR000322 Glyco_hydro_31 261 750
No external refs found!