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  5. Gb_04165

Gb_04165 (HVE, TIP120, CAND1,...)


Aliases : HVE, TIP120, CAND1, ATCAND1, ETA2

Description : adaptor protein exchange factor (CAND1)


Gene families : OG0003255 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003255_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_04165
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
Aev_g04885 HVE, TIP120,... adaptor protein exchange factor *(CAND1) & original... 0.03 OrthoFinder output from all 47 species
Als_g29146 HVE, TIP120,... adaptor protein exchange factor *(CAND1) & original... 0.04 OrthoFinder output from all 47 species
Aob_g12797 HVE, TIP120,... adaptor protein exchange factor *(CAND1) & original... 0.05 OrthoFinder output from all 47 species
Aspi01Gene20614.t1 HVE, TIP120,... not classified & original description: none 0.07 OrthoFinder output from all 47 species
Azfi_s0002.g001330 HVE, TIP120,... adaptor protein exchange factor *(CAND1) & original... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000383.39 HVE, TIP120,... Protein degradation.peptide tagging.Related-to-Ubiquitin... 0.03 OrthoFinder output from all 47 species
Cre03.g177053 HVE, TIP120,... Protein degradation.peptide tagging.Related-to-Ubiquitin... 0.01 OrthoFinder output from all 47 species
Dcu_g04133 HVE, TIP120,... adaptor protein exchange factor *(CAND1) & original... 0.05 OrthoFinder output from all 47 species
Dde_g01757 HVE, TIP120,... adaptor protein exchange factor *(CAND1) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01023143001 HVE, TIP120,... Protein degradation.peptide tagging.Related-to-Ubiquitin... 0.05 OrthoFinder output from all 47 species
LOC_Os02g07120.1 HVE, TIP120,... adaptor protein exchange factor (CAND1) 0.05 OrthoFinder output from all 47 species
Lfl_g08338 HVE, TIP120,... adaptor protein exchange factor *(CAND1) & original... 0.06 OrthoFinder output from all 47 species
MA_15038g0010 HVE, TIP120,... adaptor protein exchange factor (CAND1) 0.05 OrthoFinder output from all 47 species
Mp1g02440.1 HVE, TIP120,... adaptor protein exchange factor (CAND1) 0.06 OrthoFinder output from all 47 species
Nbi_g06332 HVE, TIP120,... adaptor protein exchange factor *(CAND1) & original... 0.04 OrthoFinder output from all 47 species
Ore_g20444 HVE, TIP120,... adaptor protein exchange factor *(CAND1) & original... 0.03 OrthoFinder output from all 47 species
Pir_g02857 HVE, TIP120,... adaptor protein exchange factor *(CAND1) & original... 0.05 OrthoFinder output from all 47 species
Ppi_g17423 HVE, TIP120,... adaptor protein exchange factor *(CAND1) & original... 0.03 OrthoFinder output from all 47 species
Sam_g26565 No alias adaptor protein exchange factor *(CAND1) & original... 0.02 OrthoFinder output from all 47 species
Smo165037 HVE, TIP120,... Protein degradation.peptide tagging.Related-to-Ubiquitin... 0.05 OrthoFinder output from all 47 species
Solyc01g103010.4.1 HVE, TIP120,... adaptor protein exchange factor (CAND1) 0.05 OrthoFinder output from all 47 species
Spa_g15706 HVE, TIP120,... adaptor protein exchange factor *(CAND1) & original... 0.04 OrthoFinder output from all 47 species
Tin_g01276 HVE, TIP120,... adaptor protein exchange factor *(CAND1) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e025157_P002 HVE, TIP120,... adaptor protein exchange factor (CAND1) 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR013932 TATA-bd_TIP120 1043 1195
No external refs found!